ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-r.7	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-m.9	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-e.2	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-m.4.bio	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-m.4.hor	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-m.4.lig	AT1G27480	alpha/beta-Hydrolases superfamily protein
ath-m.4.str	AT1G27480	alpha/beta-Hydrolases superfamily protein
bra-r.6	103829056	lecithin-cholesterol acyltransferase-like 1
bna-r.1	106425458	lecithin-cholesterol acyltransferase-like 1
bna-r.1	106358028	lecithin-cholesterol acyltransferase-like 1
ghi-r.1	107957897	lecithin-cholesterol acyltransferase-like 1
ghi-r.1	107905156	lecithin-cholesterol acyltransferase-like 1
cit-r.1	102607629	lecithin-cholesterol acyltransferase-like 1
gma-u.5	100804027	lecithin-cholesterol acyltransferase-like 1
vvi-u.5	100262564	lecithin-cholesterol acyltransferase-like 1
vvi-u.5	100260799	lecithin-cholesterol acyltransferase-like 1
ppo-u.5	7497319	lecithin-cholesterol acyltransferase-like 1
mtr-u.5	25489980	lecithin-cholesterol acyltransferase-like 1
sly-u.5	101245364	lecithin-cholesterol acyltransferase-like 1
sot-r.1	102597068	lecithin-cholesterol acyltransferase-like 1
nta-r.1	107818357	lecithin-cholesterol acyltransferase-like 1
zma-u.5	100280003	uncharacterized LOC100280003
zma-u.5	100284667	1-O-acylceramide synthase
zma-u.5	103643956	lecithin-cholesterol acyltransferase-like 1
tae-r.2	123076792	lecithin-cholesterol acyltransferase-like 1
tae-r.2	123087693	lecithin-cholesterol acyltransferase-like 1
hvu-r.1	123449252	lecithin-cholesterol acyltransferase-like 1
hvu-r.1	123442489	lecithin-cholesterol acyltransferase-like 1
sbi-r.1	8060532	lecithin-cholesterol acyltransferase-like 1
sbi-r.1	8060812	lecithin-cholesterol acyltransferase-like 1
bdi-r.1	100835295	lecithin-cholesterol acyltransferase-like 1
bdi-r.1	100841379	lecithin-cholesterol acyltransferase-like 1
bdi-r.1	100825103	lecithin-cholesterol acyltransferase-like 1
cre-r.1	CHLRE_12g559555v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000325 [list] [network] plant-type vacuole	(788 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

GO:0008374 [list] [network] O-acyltransferase activity

(79 genes)

IEA

Protein

NP_564286.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 1, golg 1, mito 1, plas 1, extr 1, E.R. 1, E.R._plas 1, mito_plas 1

(predict for NP_564286.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_564286.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT1G27480	ath-u.5 for AT1G27480	ath-r.7 for AT1G27480	ath-m.9 for AT1G27480	ath-e.2 for AT1G27480	ath-m.4.bio for AT1G27480	ath-m.4.hor for AT1G27480	ath-m.4.lig for AT1G27480	ath-m.4.str for AT1G27480	bra-r.6 for 103829056	bna-r.1 for 106425458	bna-r.1 for 106358028	ghi-r.1 for 107957897	ghi-r.1 for 107905156	cit-r.1 for 102607629	gma-u.5 for 100804027	vvi-u.5 for 100262564	vvi-u.5 for 100260799	ppo-u.5 for 7497319	mtr-u.5 for 25489980	sly-u.5 for 101245364	sot-r.1 for 102597068	nta-r.1 for 107818357	zma-u.5 for 100280003	zma-u.5 for 100284667	zma-u.5 for 103643956	tae-r.2 for 123076792	tae-r.2 for 123087693	hvu-r.1 for 123449252	hvu-r.1 for 123442489	sbi-r.1 for 8060532	sbi-r.1 for 8060812	bdi-r.1 for 100835295	bdi-r.1 for 100841379	bdi-r.1 for 100825103	cre-r.1 for CHLRE_12g559555v5

Ortholog

Ortholog ID: 1820

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

alpha/beta-Hydrolases superfamily protein

lecithin-cholesterol acyltransferase-like 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00906	Carotenoid biosynthesis	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00941	Flavonoid biosynthesis	2
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00941	Flavonoid biosynthesis	3
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00195	Photosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	4
tae01200	Carbon metabolism	4
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	4
hvu01200	Carbon metabolism	4
hvu00260	Glycine, serine and threonine metabolism	2
hvu00630	Glyoxylate and dicarboxylate metabolism	2
hvu00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00941	Flavonoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

839639

103829056

106425458

106358028

107957897

107905156

102607629

100804027

100262564

100260799

7497319

25489980

101245364

102597068

107818357

4329826

4329823

4329820

103643956

103647285

103649606

123090972

123442489

123447664

8073313

8085260

100835295

100841379

100825103

5728378

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT1G27480 (ath-m.4.tis coexpression data)

Top 50 enrichment test to AT1G27480 (ath-m.4.tis coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	zma	tae	hvu	sbi	bdi	cre	osa
Paralog	9	1	2	2	1	1	2	1	1	1	1	1	3	2	2	2	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G27480 (ath-m.4.tis coexpression data)

Top 50 enrichment test to AT1G27480 (ath-m.4.tis coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**