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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT1G48100   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G48100   Pectin lyase-like superfamily protein 
 ath-r.7   AT1G48100   Pectin lyase-like superfamily protein 
 ath-m.9   AT1G48100   Pectin lyase-like superfamily protein 
 ath-e.2   AT1G48100   Pectin lyase-like superfamily protein 
 ath-m.4.bio   AT1G48100   Pectin lyase-like superfamily protein 
 ath-m.4.hor   AT1G48100   Pectin lyase-like superfamily protein 
 ath-m.4.lig   AT1G48100   Pectin lyase-like superfamily protein 
 ath-m.4.str   AT1G48100   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G02460   Pectin lyase-like superfamily protein 
 bra-r.6   103871496   polygalacturonase At1g48100 
 bra-r.6   103844581   polygalacturonase At1g48100 
 bna-r.1   106370081   polygalacturonase At1g48100 
 bna-r.1   106346401   polygalacturonase At1g48100 
 bna-r.1   106352669   polygalacturonase At1g48100-like 
 ghi-r.1   107910548   polygalacturonase At1g48100 
 cit-r.1   102625396   polygalacturonase At1g48100 
 gma-u.5   PG7   polygalacturonase precursor 
 gma-u.5   100820085   polygalacturonase At1g48100 
 gma-u.5   100809979   polygalacturonase At1g48100 
 vvi-u.5   100264928   polygalacturonase At1g48100 
 vvi-u.5   100263206   polygalacturonase At1g48100 
 ppo-u.5   7498233   polygalacturonase At1g48100 
 mtr-u.5   11410191   polygalacturonase At1g48100 
 mtr-u.5   11412440   polygalacturonase At1g48100 
 mtr-u.5   11435306   polygalacturonase At1g48100 
 sly-u.5   101266864   polygalacturonase At1g48100 
 sly-u.5   101259291   polygalacturonase At1g48100 
 sly-u.5   101261316   polygalacturonase At1g48100 
 sot-r.1   102593770   polygalacturonase At1g48100-like 
 sot-r.1   102589249   polygalacturonase At1g48100 
 nta-r.1   107782467   polygalacturonase At1g48100-like 
 nta-r.1   107816578   polygalacturonase At1g48100-like 
 nta-r.1   107761253   polygalacturonase At1g48100 
 osa-u.5   4326721   polygalacturonase At1g48100 
 osa-u.5   4326983   polygalacturonase At1g48100 
 osa-u.5   4338287   polygalacturonase At1g48100 
 zma-u.5   103635045   polygalacturonase At1g48100 
 zma-u.5   103635108   polygalacturonase At1g48100 
 zma-u.5   100194076   uncharacterized LOC100194076 
 tae-r.2   123168859   polygalacturonase At1g48100 
 tae-r.2   123160906   polygalacturonase At1g48100 
 tae-r.2   123182459   polygalacturonase At1g48100 
 hvu-r.1   123413542   polygalacturonase At1g48100-like 
 hvu-r.1   123410081   polygalacturonase At1g48100-like 
 sbi-r.1   8075300   polygalacturonase At1g48100 
 sbi-r.1   8060309   polygalacturonase At1g48100 
 bdi-r.1   100827672   polygalacturonase At1g48100 
 bdi-r.1   100821491   polygalacturonase At1g48100 

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Top 50 coexpressed genes to AT1G48100 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G48100 (ath-m.4.tis coexpression data)

CoexMap"841228"


athAT1G48100 | Entrez gene ID : 841228      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 1 1 3 2 1 3 3 2 3 3 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009831 [list] [network] plant-type cell wall modification involved in multidimensional cell growth  (8 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (69 genes)  IDA  
Protein NP_175244.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 4,  cyto 1,  vacu 1  (predict for NP_175244.1)
Subcellular
localization
TargetP
mito 4,  scret 3  (predict for NP_175244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT1G48100
ath-u.5
for
AT1G48100
ath-r.7
for
AT1G48100
ath-m.9
for
AT1G48100
ath-e.2
for
AT1G48100
ath-m.4.bio
for
AT1G48100
ath-m.4.hor
for
AT1G48100
ath-m.4.lig
for
AT1G48100
ath-m.4.str
for
AT1G48100
ath-u.5
for
AT1G02460
bra-r.6
for
103871496
bra-r.6
for
103844581
bna-r.1
for
106370081
bna-r.1
for
106346401
bna-r.1
for
106352669
ghi-r.1
for
107910548
cit-r.1
for
102625396
gma-u.5
for
PG7
gma-u.5
for
100820085
gma-u.5
for
100809979
vvi-u.5
for
100264928
vvi-u.5
for
100263206
ppo-u.5
for
7498233
mtr-u.5
for
11410191
mtr-u.5
for
11412440
mtr-u.5
for
11435306
sly-u.5
for
101266864
sly-u.5
for
101259291
sly-u.5
for
101261316
sot-r.1
for
102593770
sot-r.1
for
102589249
nta-r.1
for
107782467
nta-r.1
for
107816578
nta-r.1
for
107761253
osa-u.5
for
4326721
osa-u.5
for
4326983
osa-u.5
for
4338287
zma-u.5
for
103635045
zma-u.5
for
103635108
zma-u.5
for
100194076
tae-r.2
for
123168859
tae-r.2
for
123160906
tae-r.2
for
123182459
hvu-r.1
for
123413542
hvu-r.1
for
123410081
sbi-r.1
for
8075300
sbi-r.1
for
8060309
bdi-r.1
for
100827672
bdi-r.1
for
100821491


Ortholog ID: 1363
Species ath ath bra bra bna bna bna ghi cit gma vvi vvi ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol AT1G48100 AT1G02460 LOC103871496 LOC103843750 LOC106370081 LOC106352669 LOC106377342 LOC107923294 LOC102625396 LOC100797770 LOC100264928 LOC100263206 LOC18102624 LOC11410191 LOC11435306 LOC25493429 LOC101266864 LOC101259291 LOC101261316 LOC102593770 LOC102589249 LOC107782467 LOC107802133 LOC107811666 LOC4326721 LOC4326983 LOC4338287 LOC103635045 LOC100194076 LOC100284066 LOC123168859 LOC123160906 LOC123060823 LOC123413542 LOC123410081 LOC8075300 LOC8060309 LOC100827672 LOC100821491
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 uncharacterized LOC100194076 polygalacturonase polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00190 Oxidative phosphorylation 2
bra01200 Carbon metabolism 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
nta00040 Pentose and glucuronate interconversions 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841228 839443 103871496 103843750 106370081 106352669 106377342 107923294 102625396 100797770 100264928 100263206 18102624 11410191 11435306 25493429 101266864 101259291 101261316 102593770 102589249 107782467 107802133 107811666 4326721 4326983 4338287 103635045 100194076 100284066 123168859 123160906 123060823 123413542 123410081 8075300 8060309 100827672 100821491
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