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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT1G53600   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103871117   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 bna-r.1   106345938   pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like 
 bna-r.1   106403754   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 ghi-r.1   107914703   pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like 
 ghi-r.1   107903779   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 cit-r.1   102630543   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 gma-u.5   100781013   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 vvi-u.5   100266773   pentatricopeptide (PPR) repeat-containing protein-like 
 mtr-u.5   11406819   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 sly-u.5   101267683   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 sot-r.1   102587602   pentatricopeptide repeat-containing protein At1g53600, mitochondrial 
 nta-r.1   107828574   pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like 
 nta-r.1   107820296   pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like 

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Top 50 coexpressed genes to AT1G53600 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G53600 (ath-m.4.tis coexpression data)

CoexMap"841795"


athAT1G53600 | Entrez gene ID : 841795      
Species ath bra bna ghi cit gma vvi mtr sly sot nta sbi osa tae hvu ppo zma cre bdi
Paralog 9 1 2 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (230 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001321251.1 [sequence] [blastp]
NP_175765.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_001321251.1)
chlo 6,  chlo_mito 4,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_175765.2)
Subcellular
localization
TargetP
mito 6  (predict for NP_001321251.1)
mito 6  (predict for NP_175765.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT1G53600
ath-u.5
for
AT1G53600
ath-r.7
for
AT1G53600
ath-m.9
for
AT1G53600
ath-e.2
for
AT1G53600
ath-m.4.bio
for
AT1G53600
ath-m.4.hor
for
AT1G53600
ath-m.4.lig
for
AT1G53600
ath-m.4.str
for
AT1G53600
bra-r.6
for
103871117
bna-r.1
for
106345938
bna-r.1
for
106403754
ghi-r.1
for
107914703
ghi-r.1
for
107903779
cit-r.1
for
102630543
gma-u.5
for
100781013
vvi-u.5
for
100266773
mtr-u.5
for
11406819
sly-u.5
for
101267683
sot-r.1
for
102587602
nta-r.1
for
107828574
nta-r.1
for
107820296


Ortholog ID: 11502
Species ath bra bna bna ghi ghi cit gma vvi mtr sly sot nta nta
Symbol AT1G53600 LOC103871117 LOC106345938 LOC106403754 LOC107914703 LOC107903779 LOC102630543 LOC100781013 LOC100266773 LOC11406819 LOC101267683 LOC102587602 LOC107828574 LOC107820296
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide (PPR) repeat-containing protein-like pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841795 103871117 106345938 106403754 107914703 107903779 102630543 100781013 100266773 11406819 101267683 102587602 107828574 107820296
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