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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-u.5   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-r.7   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-m.9   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-e.2   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-m.4.bio   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-m.4.hor   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-m.4.lig   AT1G74730   transmembrane protein, putative (DUF1118) 
 ath-m.4.str   AT1G74730   transmembrane protein, putative (DUF1118) 
 bra-r.6   103852921   uncharacterized LOC103852921 
 bra-r.6   103831934   uncharacterized LOC103831934 
 bna-r.1   BNACNNG08290D   uncharacterized BNACNNG08290D 
 bna-r.1   BNAC06G35550D   uncharacterized BNAC06G35550D 
 bna-r.1   BNAA07G31700D   uncharacterized BNAA07G31700D 
 ghi-r.1   121225518   uncharacterized LOC121225518 
 ghi-r.1   107920828   uncharacterized LOC107920828 
 cit-r.1   102607239   uncharacterized LOC102607239 
 gma-u.5   100816458   uncharacterized LOC100816458 
 gma-u.5   100783904   uncharacterized LOC100783904 
 vvi-u.5   100250168   uncharacterized LOC100250168 
 ppo-u.5   18105818   uncharacterized LOC18105818 
 ppo-u.5   7484752   uncharacterized LOC7484752 
 mtr-u.5   25493204   uncharacterized LOC25493204 
 sly-u.5   101245045   uncharacterized LOC101245045 
 sot-r.1   102582737   uncharacterized LOC102582737 
 nta-r.1   107802475   uncharacterized LOC107802475 
 nta-r.1   107771029   uncharacterized LOC107771029 
 osa-u.5   4327654   uncharacterized LOC4327654 
 zma-u.5   100276623   uncharacterized LOC100276623 
 tae-r.2   123078469   uncharacterized LOC123078469 
 tae-r.2   123070010   uncharacterized LOC123070010 
 tae-r.2   123061364   uncharacterized LOC123061364 
 hvu-r.1   123439925   uncharacterized LOC123439925 
 sbi-r.1   110433388   uncharacterized LOC110433388 
 bdi-r.1   100826971   uncharacterized LOC100826971 

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Top 50 coexpressed genes to AT1G74730 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G74730 (ath-m.4.tis coexpression data)

CoexMap"843812"


athAT1G74730 | Entrez gene ID : 843812      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090391 [list] [network] granum assembly  (6 genes)  IMP  
GO:0010196 [list] [network] nonphotochemical quenching  (17 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO CC
GO:0009515 [list] [network] granal stacked thylakoid  (4 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_565091.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 1,  extr 1,  pero 1  (predict for NP_565091.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_565091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT1G74730
ath-u.5
for
AT1G74730
ath-r.7
for
AT1G74730
ath-m.9
for
AT1G74730
ath-e.2
for
AT1G74730
ath-m.4.bio
for
AT1G74730
ath-m.4.hor
for
AT1G74730
ath-m.4.lig
for
AT1G74730
ath-m.4.str
for
AT1G74730
bra-r.6
for
103852921
bra-r.6
for
103831934
bna-r.1
for
BNACNNG08290D
bna-r.1
for
BNAC06G35550D
bna-r.1
for
BNAA07G31700D
ghi-r.1
for
121225518
ghi-r.1
for
107920828
cit-r.1
for
102607239
gma-u.5
for
100816458
gma-u.5
for
100783904
vvi-u.5
for
100250168
ppo-u.5
for
18105818
ppo-u.5
for
7484752
mtr-u.5
for
25493204
sly-u.5
for
101245045
sot-r.1
for
102582737
nta-r.1
for
107802475
nta-r.1
for
107771029
osa-u.5
for
4327654
zma-u.5
for
100276623
tae-r.2
for
123078469
tae-r.2
for
123070010
tae-r.2
for
123061364
hvu-r.1
for
123439925
sbi-r.1
for
110433388
bdi-r.1
for
100826971


Ortholog ID: 8772
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT1G74730 LOC103852921 LOC103831934 BNACNNG08290D BNAC06G35550D LOC106379481 LOC121225518 LOC107920828 LOC102607239 LOC100816458 LOC100783904 LOC100250168 LOC18105818 LOC7484752 LOC25493204 LOC101245045 LOC102582737 LOC107802475 LOC107771029 LOC4327654 LOC100276623 LOC123078469 LOC123070010 LOC123061364 LOC123439925 LOC110433388 LOC100826971
Function* transmembrane protein, putative (DUF1118) uncharacterized LOC103852921 uncharacterized LOC103831934 uncharacterized BNACNNG08290D uncharacterized BNAC06G35550D uncharacterized LOC106379481 uncharacterized LOC121225518 uncharacterized LOC107920828 uncharacterized LOC102607239 uncharacterized LOC100816458 uncharacterized LOC100783904 uncharacterized LOC100250168 uncharacterized LOC18105818 uncharacterized LOC7484752 uncharacterized LOC25493204 uncharacterized LOC101245045 uncharacterized LOC102582737 uncharacterized LOC107802475 uncharacterized LOC107771029 uncharacterized LOC4327654 uncharacterized LOC100276623 uncharacterized LOC123078469 uncharacterized LOC123070010 uncharacterized LOC123061364 uncharacterized LOC123439925 uncharacterized LOC110433388 uncharacterized LOC100826971
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 5
bra01200 Carbon metabolism 5
bra00010 Glycolysis / Gluconeogenesis 2
bra01230 Biosynthesis of amino acids 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 10
gma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00196 Photosynthesis - antenna proteins 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 10
zma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 7
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00860 Porphyrin metabolism 3
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 9
tae01200 Carbon metabolism 9
tae00195 Photosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00196 Photosynthesis - antenna proteins 3
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843812 103852921 103831934 106376639 106404465 106379481 121225518 107920828 102607239 100816458 100783904 100250168 18105818 7484752 25493204 101245045 102582737 107802475 107771029 4327654 100276623 123078469 123070010 123061364 123439925 110433388 100826971
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