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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   RPS9   ribosomal protein S9 
 ath-u.5   RPS9   ribosomal protein S9 
 ath-r.7   RPS9   ribosomal protein S9 
 ath-m.9   RPS9   ribosomal protein S9 
 ath-e.2   RPS9   ribosomal protein S9 
 ath-m.4.bio   RPS9   ribosomal protein S9 
 ath-m.4.hor   RPS9   ribosomal protein S9 
 ath-m.4.lig   RPS9   ribosomal protein S9 
 ath-m.4.str   RPS9   ribosomal protein S9 
 bra-r.6   103831956   30S ribosomal protein S9, chloroplastic 
 bra-r.6   103830673   30S ribosomal protein S9, chloroplastic 
 bna-r.1   106387252   30S ribosomal protein S9, chloroplastic 
 bna-r.1   106406295   30S ribosomal protein S9, chloroplastic 
 bna-r.1   106354529   30S ribosomal protein S9, chloroplastic 
 ghi-r.1   107935580   30S ribosomal protein S9, chloroplastic 
 ghi-r.1   107943002   30S ribosomal protein S9, chloroplastic 
 ghi-r.1   107942860   30S ribosomal protein S9, chloroplastic 
 cit-r.1   102615210   30S ribosomal protein S9, chloroplastic 
 gma-u.5   100811697   30S ribosomal protein S9 
 gma-u.5   100305975   uncharacterized LOC100305975 
 vvi-u.5   100248841   small ribosomal subunit protein uS9c 
 ppo-u.5   18104987   30S ribosomal protein S9, chloroplastic 
 ppo-u.5   7483767   30S ribosomal protein S9, chloroplastic 
 mtr-u.5   11412587   30S ribosomal protein S9, chloroplastic 
 sly-u.5   101246242   small ribosomal subunit protein uS9c 
 sot-r.1   102590993   30S ribosomal protein S9, chloroplastic 
 nta-r.1   107788887   small ribosomal subunit protein uS9c 
 nta-r.1   107810208   small ribosomal subunit protein uS9c 
 osa-u.5   4334247   small ribosomal subunit protein uS9c 
 zma-u.5   732840   30S ribosomal protein S9 chloroplastic-like 
 tae-r.2   123122964   30S ribosomal protein S9, chloroplastic 
 tae-r.2   123113446   30S ribosomal protein S9, chloroplastic 
 tae-r.2   123105156   30S ribosomal protein S9, chloroplastic 
 hvu-r.1   123452406   30S ribosomal protein S9, chloroplastic 
 sbi-r.1   8083964   30S ribosomal protein S9, chloroplastic 
 bdi-r.1   100832075   30S ribosomal protein S9, chloroplastic 

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Top 50 coexpressed genes to RPS9 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPS9 (ath-m.4.tis coexpression data)

CoexMap"843836"


athRPS9 | Entrez gene ID : 843836      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  TAS  
GO CC
GO:0000312 [list] [network] plastid small ribosomal subunit  (2 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_177635.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_177635.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_177635.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
RPS9
ath-u.5
for
RPS9
ath-r.7
for
RPS9
ath-m.9
for
RPS9
ath-e.2
for
RPS9
ath-m.4.bio
for
RPS9
ath-m.4.hor
for
RPS9
ath-m.4.lig
for
RPS9
ath-m.4.str
for
RPS9
bra-r.6
for
103831956
bra-r.6
for
103830673
bna-r.1
for
106387252
bna-r.1
for
106406295
bna-r.1
for
106354529
ghi-r.1
for
107935580
ghi-r.1
for
107943002
ghi-r.1
for
107942860
cit-r.1
for
102615210
gma-u.5
for
100811697
gma-u.5
for
100305975
vvi-u.5
for
100248841
ppo-u.5
for
18104987
ppo-u.5
for
7483767
mtr-u.5
for
11412587
sly-u.5
for
101246242
sot-r.1
for
102590993
nta-r.1
for
107788887
nta-r.1
for
107810208
osa-u.5
for
4334247
zma-u.5
for
732840
tae-r.2
for
123122964
tae-r.2
for
123113446
tae-r.2
for
123105156
hvu-r.1
for
123452406
sbi-r.1
for
8083964
bdi-r.1
for
100832075


Ortholog ID: 7855
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol RPS9 LOC103831956 LOC103830673 LOC106387252 LOC106406295 LOC106354529 LOC107935580 LOC107943002 LOC107942860 LOC102615210 LOC100811697 LOC100305975 LOC100248841 LOC18104987 LOC7483767 LOC11412587 LOC101246242 LOC102590993 LOC107788887 LOC107810208 LOC4334247 LOC732840 LOC123122964 LOC123113446 LOC123105156 LOC123452406 LOC8083964 LOC100832075
Function* ribosomal protein S9 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9 uncharacterized LOC100305975 small ribosomal subunit protein uS9c 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic small ribosomal subunit protein uS9c 30S ribosomal protein S9, chloroplastic small ribosomal subunit protein uS9c small ribosomal subunit protein uS9c small ribosomal subunit protein uS9c 30S ribosomal protein S9 chloroplastic-like 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic 30S ribosomal protein S9, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo01240 Biosynthesis of cofactors 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00900 Terpenoid backbone biosynthesis 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843836 103831956 103830673 106387252 106406295 106354529 107935580 107943002 107942860 102615210 100811697 100305975 100248841 18104987 7483767 11412587 101246242 102590993 107788887 107810208 4334247 732840 123122964 123113446 123105156 123452406 8083964 100832075
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