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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT4G02405   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT4G02405   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2   AT4G02405   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103858765   putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 
 ghi-r.1   107931209   O-methyltransferase 1, chloroplastic 
 cit-r.1   102608245   hypothetical protein 
 gma-u.5   100810891   O-methyltransferase 1, chloroplastic 
 vvi-u.5   100245173   O-methyltransferase 1, chloroplastic 
 ppo-u.5   7487787   O-methyltransferase 1, chloroplastic 
 sly-u.5   101246066   O-methyltransferase 1, chloroplastic 
 sot-r.1   102581546   putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 
 nta-r.1   107832095   O-methyltransferase 1, chloroplastic 
 nta-r.1   107784976   O-methyltransferase 1, chloroplastic 
 osa-u.5   4342830   O-methyltransferase 1, chloroplastic-like 
 zma-u.5   100274233   uncharacterized LOC100274233 
 tae-r.2   123102942   O-methyltransferase 1, chloroplastic 
 tae-r.2   123111102   O-methyltransferase 1, chloroplastic 
 tae-r.2   123120096   O-methyltransferase 1, chloroplastic 
 hvu-r.1   123395565   O-methyltransferase 1, chloroplastic 
 sbi-r.1   8054413   putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 
 bdi-r.1   100823718   putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 
 bdi-r.1   100841668   putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 
 cre-r.1   CHLRE_09g387282v5   uncharacterized protein 
 cre-r.1   CHLRE_11g478300v5   uncharacterized protein 
 cre-r.1   CHLRE_01g055469v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G02405 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G02405 (ath-r.7 coexpression data)

CoexMap"2745606"


athAT4G02405 | Entrez gene ID : 2745606      
Species ath bra ghi cit gma vvi ppo sly sot nta osa zma tae hvu sbi bdi cre bna mtr
Paralog 3 1 1 1 1 1 1 1 1 2 1 1 3 1 1 2 3 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032259 [list] [network] methylation  (78 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (188 genes)  IEA  
Protein NP_001118916.1 [sequence] [blastp]
NP_974502.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_001118916.1)
chlo 7,  mito 2  (predict for NP_974502.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001118916.1)
chlo 8  (predict for NP_974502.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT4G02405
ath-u.5
for
AT4G02405
ath-e.2
for
AT4G02405
bra-r.6
for
103858765
ghi-r.1
for
107931209
cit-r.1
for
102608245
gma-u.5
for
100810891
vvi-u.5
for
100245173
ppo-u.5
for
7487787
sly-u.5
for
101246066
sot-r.1
for
102581546
nta-r.1
for
107832095
nta-r.1
for
107784976
osa-u.5
for
4342830
zma-u.5
for
100274233
tae-r.2
for
123102942
tae-r.2
for
123111102
tae-r.2
for
123120096
hvu-r.1
for
123395565
sbi-r.1
for
8054413
bdi-r.1
for
100823718
bdi-r.1
for
100841668
cre-r.1
for
CHLRE_09g387282v5
cre-r.1
for
CHLRE_11g478300v5
cre-r.1
for
CHLRE_01g055469v5


Ortholog ID: 9896
Species ath bra ghi ghi cit gma vvi ppo sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre cre cre
Symbol AT4G02405 LOC103858765 LOC107931209 LOC107946070 LOC102608245 LOC100810891 LOC100245173 LOC7487787 LOC101246066 LOC102581546 LOC107832095 LOC107784976 LOC4342830 LOC100274233 LOC123102942 LOC123111102 LOC123120096 LOC123395565 LOC8054413 LOC100823718 LOC100841668 CHLRE_09g387282v5 CHLRE_11g478300v5 CHLRE_01g055469v5
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic hypothetical protein O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic-like uncharacterized LOC100274233 O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic O-methyltransferase 1, chloroplastic putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1480/MSMEI_1444 putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 4
bra01230 Biosynthesis of amino acids 4
bra01240 Biosynthesis of cofactors 3
bra01200 Carbon metabolism 2
bra00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00190 Oxidative phosphorylation 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 2745606 103858765 107931209 107946070 102608245 100810891 100245173 7487787 101246066 102581546 107832095 107784976 4342830 100274233 123102942 123111102 123120096 123395565 8054413 100823718 100841668 5720563 5722890 5725786
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