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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT4G01400   oligomeric golgi complex subunit-like protein 
 ath-u.5   AT4G01400   oligomeric golgi complex subunit-like protein 
 ath-e.2   AT4G01400   oligomeric golgi complex subunit-like protein 
 bra-r.6   103874957   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 bna-r.1   106447852   pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like 
 bna-r.1   111202324   pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like 
 ghi-r.1   107942833   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 ghi-r.1   107923393   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 gma-u.5   102659603   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 ppo-u.5   7455364   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 sly-u.5   101245328   pentatricopeptide repeat-containing protein 
 sot-r.1   102603919   pentatricopeptide repeat-containing protein At4g01400, mitochondrial 
 nta-r.1   107769287   uncharacterized LOC107769287 
 nta-r.1   107808425   uncharacterized LOC107808425 

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Top 50 coexpressed genes to AT4G01400 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G01400 (ath-r.7 coexpression data)

CoexMap"28719435"


athAT4G01400 | Entrez gene ID : 28719435      
Species ath bra bna ghi gma ppo sly sot nta sbi osa cit mtr tae hvu vvi zma cre bdi
Paralog 3 1 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032981 [list] [network] mitochondrial respiratory chain complex I assembly  (8 genes)  IMP  
GO:0000963 [list] [network] mitochondrial RNA processing  (26 genes)  IMP  
GO:0000373 [list] [network] Group II intron splicing  (28 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO MF
Protein NP_001154199.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2  (predict for NP_001154199.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001154199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT4G01400
ath-u.5
for
AT4G01400
ath-e.2
for
AT4G01400
bra-r.6
for
103874957
bna-r.1
for
106447852
bna-r.1
for
111202324
ghi-r.1
for
107942833
ghi-r.1
for
107923393
gma-u.5
for
102659603
ppo-u.5
for
7455364
sly-u.5
for
101245328
sot-r.1
for
102603919
nta-r.1
for
107769287
nta-r.1
for
107808425


Ortholog ID: 14403
Species ath bra bna bna ghi ghi gma ppo sly sot nta nta
Symbol AT4G01400 LOC103874957 LOC106447852 LOC111202324 LOC107942833 LOC107923393 LOC102659603 LOC7455364 LOC101245328 LOC102603919 LOC107769287 LOC107808425
Function* oligomeric golgi complex subunit-like protein pentatricopeptide repeat-containing protein At4g01400, mitochondrial pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like pentatricopeptide repeat-containing protein At4g01400, mitochondrial pentatricopeptide repeat-containing protein At4g01400, mitochondrial pentatricopeptide repeat-containing protein At4g01400, mitochondrial pentatricopeptide repeat-containing protein At4g01400, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g01400, mitochondrial uncharacterized LOC107769287 uncharacterized LOC107808425
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28719435 103874957 106447852 111202324 107942833 107923393 102659603 7455364 101245328 102603919 107769287 107808425
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