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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-u.5   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.9   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-e.2   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.4.bio   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.4.hor   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.4.lig   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.4.str   LYM2   lysm domain GPI-anchored protein 2 precursor 
 ath-m.4.tis   LYM2   lysm domain GPI-anchored protein 2 precursor 
 bra-r.6   103845994   lysM domain-containing GPI-anchored protein 2 
 bra-r.6   103874192   lysM domain-containing GPI-anchored protein 2 
 bna-r.1   106428728   lysM domain-containing GPI-anchored protein 2 
 bna-r.1   106382053   lysM domain-containing GPI-anchored protein 2 
 bna-r.1   106368879   lysM domain-containing GPI-anchored protein 2-like 
 ghi-r.1   107945096   lysM domain-containing GPI-anchored protein 2 
 ghi-r.1   107922583   lysM domain-containing GPI-anchored protein 2 
 ghi-r.1   107925343   lysM domain-containing GPI-anchored protein 2 
 cit-r.1   102622991   lysM domain-containing GPI-anchored protein 2 
 gma-u.5   102669857   uncharacterized LOC102669857 
 gma-u.5   100804190   lysM domain-containing GPI-anchored protein 2 
 vvi-u.5   100257272   lysM domain-containing GPI-anchored protein 2 
 vvi-u.5   100262384   lysM domain-containing GPI-anchored protein 2 
 ppo-u.5   7470441   lysM domain-containing GPI-anchored protein 2 
 ppo-u.5   7472083   lysM domain-containing GPI-anchored protein 2 
 mtr-u.5   25493434   lysM domain-containing GPI-anchored protein 2 
 sly-u.5   101253732   lysM domain-containing GPI-anchored protein 2 
 sot-r.1   EI1   Erwinia induced protein 1 
 nta-r.1   107826649   lysM domain-containing GPI-anchored protein 2 
 osa-u.5   CEBIP   Chitin elicitor-binding protein 
 osa-u.5   4347773   chitin elicitor-binding protein-like 
 zma-u.5   100280377   LysM domain-containing GPI-anchored protein 2 
 tae-r.2   123122505   chitin elicitor-binding protein 
 tae-r.2   123093632   chitin elicitor-binding protein 
 tae-r.2   123101530   proline-rich protein 36 
 hvu-r.1   123451838   chitin elicitor-binding protein 
 bdi-r.1   100824937   chitin elicitor-binding protein 

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Top 50 coexpressed genes to LYM2 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LYM2 (ath-r.7 coexpression data)

CoexMap"816217"


athLYM2 | Entrez gene ID : 816217      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 9 2 3 3 1 2 2 2 1 1 1 1 2 1 3 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA IDA  
GO:0016020 [list] [network] membrane  (3740 genes)  TAS  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO MF
GO:0008061 [list] [network] chitin binding  (7 genes)  IDA  
Protein NP_565406.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_565406.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_565406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
LYM2
ath-u.5
for
LYM2
ath-m.9
for
LYM2
ath-e.2
for
LYM2
ath-m.4.bio
for
LYM2
ath-m.4.hor
for
LYM2
ath-m.4.lig
for
LYM2
ath-m.4.str
for
LYM2
ath-m.4.tis
for
LYM2
bra-r.6
for
103845994
bra-r.6
for
103874192
bna-r.1
for
106428728
bna-r.1
for
106382053
bna-r.1
for
106368879
ghi-r.1
for
107945096
ghi-r.1
for
107922583
ghi-r.1
for
107925343
cit-r.1
for
102622991
gma-u.5
for
102669857
gma-u.5
for
100804190
vvi-u.5
for
100257272
vvi-u.5
for
100262384
ppo-u.5
for
7470441
ppo-u.5
for
7472083
mtr-u.5
for
25493434
sly-u.5
for
101253732
sot-r.1
for
EI1
nta-r.1
for
107826649
osa-u.5
for
CEBIP
osa-u.5
for
4347773
zma-u.5
for
100280377
tae-r.2
for
123122505
tae-r.2
for
123093632
tae-r.2
for
123101530
hvu-r.1
for
123451838
bdi-r.1
for
100824937


Ortholog ID: 6491
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi vvi ppo ppo mtr sly sot nta osa osa zma tae tae tae hvu bdi
Symbol LYM2 LOC103845994 LOC103874192 LOC106428728 LOC106368879 LOC106348346 LOC107945096 LOC107922583 LOC107925343 LOC102622991 LOC102669857 LOC100804190 LOC100257272 LOC100262384 LOC7470441 LOC7472083 LOC25493434 LOC101253732 EI1 LOC107826649 CEBIP LOC4347773 LOC100280377 LOC123122505 LOC123101530 LOC123112993 LOC123451838 LOC100824937
Function* lysm domain GPI-anchored protein 2 precursor lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2-like lysM domain-containing GPI-anchored protein 2-like lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 uncharacterized LOC102669857 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 lysM domain-containing GPI-anchored protein 2 Erwinia induced protein 1 lysM domain-containing GPI-anchored protein 2 Chitin elicitor-binding protein chitin elicitor-binding protein-like LysM domain-containing GPI-anchored protein 2 chitin elicitor-binding protein proline-rich protein 36 chitin elicitor-binding protein chitin elicitor-binding protein chitin elicitor-binding protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00943 Isoflavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot04145 Phagosome 3
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
tae04517 IgSF CAM signaling 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04145 Phagosome 2
tae04148 Efferocytosis 2
tae04517 IgSF CAM signaling 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816217 103845994 103874192 106428728 106368879 106348346 107945096 107922583 107925343 102622991 102669857 100804190 100257272 100262384 7470441 7472083 25493434 101253732 102577660 107826649 4331522 4347773 100280377 123122505 123101530 123112993 123451838 100824937
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