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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   SMP1   seed maturation protein 
 ath-u.5   SMP1   seed maturation protein 
 ath-m.9   SMP1   seed maturation protein 
 ath-e.2   SMP1   seed maturation protein 
 ath-m.4.bio   SMP1   seed maturation protein 
 ath-m.4.hor   SMP1   seed maturation protein 
 ath-m.4.lig   SMP1   seed maturation protein 
 ath-m.4.str   SMP1   seed maturation protein 
 ath-m.4.tis   SMP1   seed maturation protein 
 bna-r.1   BNAA01G30160D   SEED MATURATION PROTEIN 1 
 bna-r.1   111210898   SEED MATURATION PROTEIN 1-like 
 gma-u.5   PM28   seed maturation protein PM28 
 vvi-u.5   100247337   SEED MATURATION PROTEIN 1 
 vvi-u.5   100265021   SEED MATURATION PROTEIN 1 
 osa-u.5   4344438   uncharacterized LOC4344438 
 zma-u.5   100279096   uncharacterized LOC100279096 
 tae-r.2   123167245   SEED MATURATION PROTEIN 1 
 tae-r.2   123151245   SEED MATURATION PROTEIN 1 
 hvu-r.1   123410380   SEED MATURATION PROTEIN 1 
 bdi-r.1   104583524   uncharacterized LOC104583524 

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Top 50 coexpressed genes to SMP1 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SMP1 (ath-r.7 coexpression data)

CoexMap"820482"


athSMP1 | Entrez gene ID : 820482      
Species ath bna gma vvi osa zma tae hvu bdi cit mtr ghi ppo nta cre sot sbi bra sly
Paralog 9 2 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010231 [list] [network] maintenance of seed dormancy  (9 genes)  IMP  
GO:0010162 [list] [network] seed dormancy process  (42 genes)  IMP  
GO:0009408 [list] [network] response to heat  (271 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0044183 [list] [network] protein folding chaperone  (23 genes)  IDA  
Protein NP_187902.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cyto 1,  chlo_mito 1  (predict for NP_187902.1)
Subcellular
localization
TargetP
other 8  (predict for NP_187902.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
SMP1
ath-u.5
for
SMP1
ath-m.9
for
SMP1
ath-e.2
for
SMP1
ath-m.4.bio
for
SMP1
ath-m.4.hor
for
SMP1
ath-m.4.lig
for
SMP1
ath-m.4.str
for
SMP1
ath-m.4.tis
for
SMP1
bna-r.1
for
BNAA01G30160D
bna-r.1
for
111210898
gma-u.5
for
PM28
vvi-u.5
for
100247337
vvi-u.5
for
100265021
osa-u.5
for
4344438
zma-u.5
for
100279096
tae-r.2
for
123167245
tae-r.2
for
123151245
hvu-r.1
for
123410380
bdi-r.1
for
104583524


Ortholog ID: 11954
Species ath bna bna gma vvi vvi osa zma tae tae hvu bdi
Symbol SMP1 BNAA01G30160D LOC111210898 PM28 LOC100247337 LOC100265021 LOC4344438 LOC100279096 LOC123167245 LOC123151245 LOC123410380 LOC104583524
Function* seed maturation protein SEED MATURATION PROTEIN 1 SEED MATURATION PROTEIN 1-like seed maturation protein PM28 SEED MATURATION PROTEIN 1 SEED MATURATION PROTEIN 1 uncharacterized LOC4344438 uncharacterized LOC100279096 SEED MATURATION PROTEIN 1 SEED MATURATION PROTEIN 1 SEED MATURATION PROTEIN 1 uncharacterized LOC104583524
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820482 106377496 111210898 547536 100247337 100265021 4344438 100279096 123167245 123151245 123410380 104583524
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