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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-u.5   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.9   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-e.2   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.4.bio   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.4.hor   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.4.lig   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.4.str   AT3G18420   Protein prenylyltransferase superfamily protein 
 ath-m.4.tis   AT3G18420   Protein prenylyltransferase superfamily protein 
 bra-r.6   103869563   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107945917   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107941247   protein SLOW GREEN 1, chloroplastic 
 cit-r.1   102617544   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   100780000   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   100808986   protein SLOW GREEN 1, chloroplastic 
 vvi-u.5   100852583   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7459077   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7471463   protein SLOW GREEN 1, chloroplastic 
 mtr-u.5   120577624   protein SLOW GREEN 1, chloroplastic 
 sly-u.5   101245871   protein SLOW GREEN 1, chloroplastic 
 sot-r.1   102603168   protein SLOW GREEN 1, chloroplastic 
 nta-r.1   107768792   protein SLOW GREEN 1, chloroplastic-like 
 nta-r.1   107813268   protein SLOW GREEN 1, chloroplastic-like 

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Top 50 coexpressed genes to AT3G18420 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G18420 (ath-r.7 coexpression data)

CoexMap"821371"


athAT3G18420 | Entrez gene ID : 821371      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta bdi osa tae bna zma cre sbi hvu
Paralog 9 1 2 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
Protein NP_566609.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1  (predict for NP_566609.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_566609.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT3G18420
ath-u.5
for
AT3G18420
ath-m.9
for
AT3G18420
ath-e.2
for
AT3G18420
ath-m.4.bio
for
AT3G18420
ath-m.4.hor
for
AT3G18420
ath-m.4.lig
for
AT3G18420
ath-m.4.str
for
AT3G18420
ath-m.4.tis
for
AT3G18420
bra-r.6
for
103869563
ghi-r.1
for
107945917
ghi-r.1
for
107941247
cit-r.1
for
102617544
gma-u.5
for
100780000
gma-u.5
for
100808986
vvi-u.5
for
100852583
ppo-u.5
for
7459077
ppo-u.5
for
7471463
mtr-u.5
for
120577624
sly-u.5
for
101245871
sot-r.1
for
102603168
nta-r.1
for
107768792
nta-r.1
for
107813268


Ortholog ID: 12898
Species ath bra ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta
Symbol AT3G18420 LOC103869563 LOC107945917 LOC107941247 LOC102617544 LOC100780000 LOC100808986 LOC100852583 LOC7459077 LOC7471463 LOC120577624 LOC101245871 LOC102603168 LOC107768792 LOC107813268
Function* Protein prenylyltransferase superfamily protein protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00250 Alanine, aspartate and glutamate metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00230 Purine metabolism 3
bra03010 Ribosome 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 3
cit01230 Biosynthesis of amino acids 3
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00750 Vitamin B6 metabolism 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma03040 Spliceosome 3
gma03010 Ribosome 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi00230 Purine metabolism 2
vvi00010 Glycolysis / Gluconeogenesis 2
vvi01200 Carbon metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 6
ppo00030 Pentose phosphate pathway 3
ppo00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr01230 Biosynthesis of amino acids 3
mtr01200 Carbon metabolism 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821371 103869563 107945917 107941247 102617544 100780000 100808986 100852583 7459077 7471463 120577624 101245871 102603168 107768792 107813268
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