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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   TRM34   uncharacterized protein 
 ath-u.5   TRM34   uncharacterized protein 
 ath-m.9   TRM34   uncharacterized protein 
 ath-e.2   TRM34   uncharacterized protein 
 ath-m.4.bio   TRM34   uncharacterized protein 
 ath-m.4.hor   TRM34   uncharacterized protein 
 ath-m.4.lig   TRM34   uncharacterized protein 
 ath-m.4.str   TRM34   uncharacterized protein 
 ath-m.4.tis   TRM34   uncharacterized protein 
 bra-r.6   103828611   uncharacterized LOC103828611 
 bna-r.1   106367681   uncharacterized LOC106367681 
 bna-r.1   106430294   uncharacterized LOC106430294 
 ghi-r.1   107933025   uncharacterized LOC107933025 
 ghi-r.1   107930776   uncharacterized LOC107930776 
 ghi-r.1   107901243   uncharacterized LOC107901243 
 cit-r.1   102621477   uncharacterized LOC102621477 
 gma-u.5   102663814   uncharacterized LOC102663814 
 gma-u.5   102663636   uncharacterized LOC102663636 
 vvi-u.5   100250746   uncharacterized LOC100250746 
 ppo-u.5   7476287   uncharacterized LOC7476287 
 mtr-u.5   11427022   uncharacterized LOC11427022 
 sly-u.5   TRM30/34a   TONNEAU1 recruiting motif 30/34a 
 sly-u.5   TRM30/34b   TONNEAU1 recruiting motif 30/34b 
 sot-r.1   102595343   uncharacterized LOC102595343 
 sot-r.1   102578795   uncharacterized LOC102578795 
 nta-r.1   107809324   uncharacterized LOC107809324 
 nta-r.1   107799581   uncharacterized LOC107799581 
 nta-r.1   107794997   uncharacterized LOC107794997 
 osa-u.5   4327191   uncharacterized LOC4327191 
 zma-u.5   100279568   uncharacterized LOC100279568 
 tae-r.2   123060785   uncharacterized LOC123060785 
 tae-r.2   123069351   uncharacterized LOC123069351 
 tae-r.2   123077866   uncharacterized LOC123077866 
 hvu-r.1   123443245   uncharacterized LOC123443245 
 sbi-r.1   8081354   uncharacterized LOC8081354 
 bdi-r.1   100839594   uncharacterized LOC100839594 

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Top 50 coexpressed genes to TRM34 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM34 (ath-r.7 coexpression data)

CoexMap"822059"


athTRM34 | Entrez gene ID : 822059      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 1 1 2 2 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001319635.1 [sequence] [blastp]
NP_189106.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  cysk 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001319635.1)
nucl 7,  cyto 1,  cysk 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_189106.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319635.1)
other 7  (predict for NP_189106.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
TRM34
ath-u.5
for
TRM34
ath-m.9
for
TRM34
ath-e.2
for
TRM34
ath-m.4.bio
for
TRM34
ath-m.4.hor
for
TRM34
ath-m.4.lig
for
TRM34
ath-m.4.str
for
TRM34
ath-m.4.tis
for
TRM34
bra-r.6
for
103828611
bna-r.1
for
106367681
bna-r.1
for
106430294
ghi-r.1
for
107933025
ghi-r.1
for
107930776
ghi-r.1
for
107901243
cit-r.1
for
102621477
gma-u.5
for
102663814
gma-u.5
for
102663636
vvi-u.5
for
100250746
ppo-u.5
for
7476287
mtr-u.5
for
11427022
sly-u.5
for
TRM30/34a
sly-u.5
for
TRM30/34b
sot-r.1
for
102595343
sot-r.1
for
102578795
nta-r.1
for
107809324
nta-r.1
for
107799581
nta-r.1
for
107794997
osa-u.5
for
4327191
zma-u.5
for
100279568
tae-r.2
for
123060785
tae-r.2
for
123069351
tae-r.2
for
123077866
hvu-r.1
for
123443245
sbi-r.1
for
8081354
bdi-r.1
for
100839594


Ortholog ID: 6885
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol TRM34 LOC103828611 LOC106367681 LOC106430294 LOC107933025 LOC107930776 LOC107901243 LOC102621477 LOC102663814 LOC100797863 LOC100250746 LOC7476287 LOC11427022 TRM30/34a TRM30/34b LOC102595343 LOC102578795 LOC107809324 LOC107799581 LOC107794997 LOC4327191 LOC100279568 LOC123060785 LOC123069351 LOC123077866 LOC123443245 LOC8081354 LOC100839594
Function* uncharacterized protein uncharacterized LOC103828611 uncharacterized LOC106367681 uncharacterized LOC106430294 uncharacterized LOC107933025 uncharacterized LOC107930776 uncharacterized LOC107901243 uncharacterized LOC102621477 uncharacterized LOC102663814 uncharacterized LOC100797863 uncharacterized LOC100250746 uncharacterized LOC7476287 uncharacterized LOC11427022 TONNEAU1 recruiting motif 30/34a TONNEAU1 recruiting motif 30/34b uncharacterized LOC102595343 uncharacterized LOC102578795 uncharacterized LOC107809324 uncharacterized LOC107799581 uncharacterized LOC107794997 uncharacterized LOC4327191 uncharacterized LOC100279568 uncharacterized LOC123060785 uncharacterized LOC123069351 uncharacterized LOC123077866 uncharacterized LOC123443245 uncharacterized LOC8081354 uncharacterized LOC100839594
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 9
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00592 alpha-Linolenic acid metabolism 3
sot00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 5
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822059 103828611 106367681 106430294 107933025 107930776 107901243 102621477 102663814 100797863 100250746 7476287 11427022 101268699 101251359 102595343 102578795 107809324 107799581 107794997 4327191 100279568 123060785 123069351 123077866 123443245 8081354 100839594
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