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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT3G48380   Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 
 ath-u.5   AT3G48380   Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 
 ath-e.2   AT3G48380   Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 
 bra-r.6   103873152   probable Ufm1-specific protease 
 bna-r.1   106428658   probable Ufm1-specific protease 
 bna-r.1   106428951   probable Ufm1-specific protease 
 ghi-r.1   107886156   probable Ufm1-specific protease 
 ghi-r.1   107949714   probable Ufm1-specific protease 
 cit-r.1   102612767   probable Ufm1-specific protease 
 gma-u.5   100819651   probable Ufm1-specific protease 
 gma-u.5   100811510   probable Ufm1-specific protease 
 vvi-u.5   100263796   probable Ufm1-specific protease 
 ppo-u.5   7463080   probable Ufm1-specific protease 
 mtr-u.5   25489512   probable Ufm1-specific protease 
 sly-u.5   101255383   probable Ufm1-specific protease 
 sot-r.1   102603289   probable Ufm1-specific protease 
 nta-r.1   107820320   putative Ufm1-specific protease 
 nta-r.1   107830878   putative Ufm1-specific protease 
 osa-u.5   4351994   probable Ufm1-specific protease 
 zma-u.5   103650432   probable Ufm1-specific protease 
 tae-r.2   123164568   probable Ufm1-specific protease 
 tae-r.2   123158978   probable Ufm1-specific protease 
 tae-r.2   123147850   probable Ufm1-specific protease 
 hvu-r.1   123413494   probable Ufm1-specific protease 
 sbi-r.1   8075279   probable Ufm1-specific protease 
 bdi-r.1   100838043   probable Ufm1-specific protease 
 cre-r.1   CHLRE_03g197900v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G48380 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G48380 (ath-r.7 coexpression data)

CoexMap"823996"


athAT3G48380 | Entrez gene ID : 823996      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001190032.1 [sequence] [blastp]
NP_680114.1 [sequence] [blastp]
NP_974402.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001190032.1)
chlo 9  (predict for NP_680114.1)
chlo 9  (predict for NP_974402.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001190032.1)
mito 3  (predict for NP_680114.1)
mito 3  (predict for NP_974402.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT3G48380
ath-u.5
for
AT3G48380
ath-e.2
for
AT3G48380
bra-r.6
for
103873152
bna-r.1
for
106428658
bna-r.1
for
106428951
ghi-r.1
for
107886156
ghi-r.1
for
107949714
cit-r.1
for
102612767
gma-u.5
for
100819651
gma-u.5
for
100811510
vvi-u.5
for
100263796
ppo-u.5
for
7463080
mtr-u.5
for
25489512
sly-u.5
for
101255383
sot-r.1
for
102603289
nta-r.1
for
107820320
nta-r.1
for
107830878
osa-u.5
for
4351994
zma-u.5
for
103650432
tae-r.2
for
123164568
tae-r.2
for
123158978
tae-r.2
for
123147850
hvu-r.1
for
123413494
sbi-r.1
for
8075279
bdi-r.1
for
100838043
cre-r.1
for
CHLRE_03g197900v5


Ortholog ID: 10139
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G48380 LOC103873152 LOC106428658 LOC106428951 LOC107886156 LOC107949714 LOC102612767 LOC100819651 LOC100811510 LOC100263796 LOC7463080 LOC25489512 LOC101255383 LOC102603289 LOC107820320 LOC107830878 LOC4351994 LOC103650432 LOC123164568 LOC123158978 LOC123147850 LOC123413494 LOC8075279 LOC100838043 CHLRE_03g197900v5
Function* Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease putative Ufm1-specific protease putative Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease probable Ufm1-specific protease uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna05100 Bacterial invasion of epithelial cells 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna05100 Bacterial invasion of epithelial cells 5
bna03050 Proteasome 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 2
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 3
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 5
tae04120 Ubiquitin mediated proteolysis 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823996 103873152 106428658 106428951 107886156 107949714 102612767 100819651 100811510 100263796 7463080 25489512 101255383 102603289 107820320 107830878 4351994 103650432 123164568 123158978 123147850 123413494 8075279 100838043 5718791
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