Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT3G54440   glycoside hydrolase family 2 protein 
 ath-u.5   AT3G54440   glycoside hydrolase family 2 protein 
 ath-e.2   AT3G54440   glycoside hydrolase family 2 protein 
 bra-r.6   103863233   beta-galactosidase 
 bna-r.1   106431377   beta-galactosidase-like 
 bna-r.1   106445462   beta-galactosidase 
 ghi-r.1   107962353   beta-galactosidase 
 ghi-r.1   107928099   beta-galactosidase 
 cit-r.1   102620592   uncharacterized LOC102620592 
 gma-u.5   100777287   beta-galactosidase 
 vvi-u.5   100241220   uncharacterized LOC100241220 
 ppo-u.5   7476845   uncharacterized LOC7476845 
 ppo-u.5   7460240   uncharacterized LOC7460240 
 mtr-u.5   11444548   beta-galactosidase 
 sly-u.5   101256611   uncharacterized LOC101256611 
 sot-r.1   102585159   beta-galactosidase 
 nta-r.1   107805179   uncharacterized LOC107805179 
 osa-u.5   4325748   uncharacterized LOC4325748 
 zma-u.5   100217216   uncharacterized LOC100217216 
 tae-r.2   123072529   beta-galactosidase 
 tae-r.2   123080747   beta-galactosidase 
 hvu-r.1   123445541   beta-galactosidase 
 sbi-r.1   110433846   beta-galactosidase 
 bdi-r.1   100839496   beta-galactosidase 
 cre-r.1   CHLRE_08g379450v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT3G54440 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G54440 (ath-r.7 coexpression data)

CoexMap"824610"


athAT3G54440 | Entrez gene ID : 824610      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00052 [list] [network] Galactose metabolism (56 genes)
ath00511 [list] [network] Other glycan degradation (19 genes)
ath00600 [list] [network] Sphingolipid metabolism (35 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0009341 [list] [network] beta-galactosidase complex  (1 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:0004565 [list] [network] beta-galactosidase activity  (13 genes)  IEA  
GO:0030246 [list] [network] carbohydrate binding  (164 genes)  IEA  
Protein NP_001030858.1 [sequence] [blastp]
NP_001190087.1 [sequence] [blastp]
NP_680128.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1,  cysk_plas 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001030858.1)
nucl 6,  chlo 1,  cysk 1,  cysk_plas 1,  cyto 1,  vacu 1,  chlo_mito 1  (predict for NP_001190087.1)
nucl 6,  chlo 1,  cysk 1,  cysk_plas 1  (predict for NP_680128.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001030858.1)
other 7  (predict for NP_001190087.1)
other 8  (predict for NP_680128.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT3G54440
ath-u.5
for
AT3G54440
ath-e.2
for
AT3G54440
bra-r.6
for
103863233
bna-r.1
for
106431377
bna-r.1
for
106445462
ghi-r.1
for
107962353
ghi-r.1
for
107928099
cit-r.1
for
102620592
gma-u.5
for
100777287
vvi-u.5
for
100241220
ppo-u.5
for
7476845
ppo-u.5
for
7460240
mtr-u.5
for
11444548
sly-u.5
for
101256611
sot-r.1
for
102585159
nta-r.1
for
107805179
osa-u.5
for
4325748
zma-u.5
for
100217216
tae-r.2
for
123072529
tae-r.2
for
123080747
hvu-r.1
for
123445541
sbi-r.1
for
110433846
bdi-r.1
for
100839496
cre-r.1
for
CHLRE_08g379450v5


Ortholog ID: 11343
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol AT3G54440 LOC103863233 LOC106431377 LOC106445462 LOC107962353 LOC107928099 LOC102620592 LOC100777287 LOC100241220 LOC7476845 LOC7460240 LOC11444548 LOC101256611 LOC102585159 LOC107805179 LOC4325748 LOC100217216 LOC123072529 LOC123080747 LOC123445541 LOC110433846 LOC100839496 CHLRE_08g379450v5
Function* glycoside hydrolase family 2 protein beta-galactosidase beta-galactosidase-like beta-galactosidase beta-galactosidase beta-galactosidase uncharacterized LOC102620592 beta-galactosidase uncharacterized LOC100241220 uncharacterized LOC7476845 uncharacterized LOC7460240 beta-galactosidase uncharacterized LOC101256611 beta-galactosidase uncharacterized LOC107805179 uncharacterized LOC4325748 uncharacterized LOC100217216 beta-galactosidase beta-galactosidase beta-galactosidase beta-galactosidase beta-galactosidase uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00071 Fatty acid degradation 4
ath00020 Citrate cycle (TCA cycle) 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
bra00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 5
bna03272 Virion - Hepatitis viruses 5
bna04144 Endocytosis 5
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 5
bna03272 Virion - Hepatitis viruses 5
bna04144 Endocytosis 5
bna00052 Galactose metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi04981 Folate transport and metabolism 2
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit01240 Biosynthesis of cofactors 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
vvi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 3
ppo00511 Other glycan degradation 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00561 Glycerolipid metabolism 2
ppo00564 Glycerophospholipid metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
nta03040 Spliceosome 2
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00511 Other glycan degradation 4
osa00052 Galactose metabolism 3
osa00600 Sphingolipid metabolism 2
osa00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00071 Fatty acid degradation 4
zma01212 Fatty acid metabolism 4
zma04146 Peroxisome 3
zma00592 alpha-Linolenic acid metabolism 3
zma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae00053 Ascorbate and aldarate metabolism 3
tae00562 Inositol phosphate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 4
tae04070 Phosphatidylinositol signaling system 4
tae01240 Biosynthesis of cofactors 4
tae00053 Ascorbate and aldarate metabolism 3
tae00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04142 Lysosome 2
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824610 103863233 106431377 106445462 107962353 107928099 102620592 100777287 100241220 7476845 7460240 11444548 101256611 102585159 107805179 4325748 100217216 123072529 123080747 123445541 110433846 100839496 5719888
The preparation time of this page was 0.1 [sec].