Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT3G55760   uncharacterized protein 
 ath-u.5   AT3G55760   uncharacterized protein 
 ath-m.9   AT3G55760   uncharacterized protein 
 ath-e.2   AT3G55760   uncharacterized protein 
 ath-m.4.bio   AT3G55760   uncharacterized protein 
 ath-m.4.hor   AT3G55760   uncharacterized protein 
 ath-m.4.lig   AT3G55760   uncharacterized protein 
 ath-m.4.str   AT3G55760   uncharacterized protein 
 ath-m.4.tis   AT3G55760   uncharacterized protein 
 bra-r.6   103834190   uncharacterized LOC103834190 
 bna-r.1   106453653   uncharacterized LOC106453653 
 bna-r.1   106453733   uncharacterized LOC106453733 
 ghi-r.1   107929148   uncharacterized LOC107929148 
 ghi-r.1   107928566   uncharacterized LOC107928566 
 cit-r.1   102630703   uncharacterized LOC102630703 
 gma-u.5   100810326   uncharacterized LOC100810326 
 vvi-u.5   100256346   protein LIKE EARLY STARVATION, chloroplastic 
 ppo-u.5   7473438   uncharacterized LOC7473438 
 mtr-u.5   25482941   uncharacterized LOC25482941 
 sly-u.5   101257179   protein LIKE EARLY STARVATION, chloroplastic 
 sot-r.1   102584633   uncharacterized LOC102584633 
 nta-r.1   107786429   protein LIKE EARLY STARVATION, chloroplastic-like 
 nta-r.1   107806834   protein LIKE EARLY STARVATION, chloroplastic 
 osa-u.5   4350800   protein LIKE EARLY STARVATION, chloroplastic 
 zma-u.5   103654538   uncharacterized LOC103654538 
 tae-r.2   123092058   uncharacterized LOC123092058 
 hvu-r.1   123448536   uncharacterized LOC123448536 
 sbi-r.1   8062676   uncharacterized LOC8062676 
 bdi-r.1   100825548   uncharacterized LOC100825548 

close


Top 50 coexpressed genes to AT3G55760 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G55760 (ath-r.7 coexpression data)

CoexMap"824742"


athAT3G55760 | Entrez gene ID : 824742      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000904 [list] [network] regulation of starch metabolic process  (17 genes)  IDA  
GO:0005982 [list] [network] starch metabolic process  (47 genes)  IMP  
GO CC
GO:0043036 [list] [network] starch grain  (8 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:2001070 [list] [network] starch binding  (8 genes)  IDA  
Protein NP_001190098.1 [sequence] [blastp]
NP_191135.1 [sequence] [blastp]
NP_850708.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for NP_001190098.1)
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for NP_191135.1)
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for NP_850708.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for NP_001190098.1)
chlo 7,  mito 4  (predict for NP_191135.1)
chlo 7,  mito 4  (predict for NP_850708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT3G55760
ath-u.5
for
AT3G55760
ath-m.9
for
AT3G55760
ath-e.2
for
AT3G55760
ath-m.4.bio
for
AT3G55760
ath-m.4.hor
for
AT3G55760
ath-m.4.lig
for
AT3G55760
ath-m.4.str
for
AT3G55760
ath-m.4.tis
for
AT3G55760
bra-r.6
for
103834190
bna-r.1
for
106453653
bna-r.1
for
106453733
ghi-r.1
for
107929148
ghi-r.1
for
107928566
cit-r.1
for
102630703
gma-u.5
for
100810326
vvi-u.5
for
100256346
ppo-u.5
for
7473438
mtr-u.5
for
25482941
sly-u.5
for
101257179
sot-r.1
for
102584633
nta-r.1
for
107786429
nta-r.1
for
107806834
osa-u.5
for
4350800
zma-u.5
for
103654538
tae-r.2
for
123092058
hvu-r.1
for
123448536
sbi-r.1
for
8062676
bdi-r.1
for
100825548


Ortholog ID: 11974
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol AT3G55760 LOC103834190 LOC106453653 LOC106453733 LOC107929148 LOC107928566 LOC102630703 LOC100810326 LOC100256346 LOC7473438 LOC25482941 LOC101257179 LOC102584633 LOC107786429 LOC107806834 LOC4350800 LOC103654538 LOC123092058 LOC123448536 LOC8062676 LOC100825548
Function* uncharacterized protein uncharacterized LOC103834190 uncharacterized LOC106453653 uncharacterized LOC106453733 uncharacterized LOC107929148 uncharacterized LOC107928566 uncharacterized LOC102630703 uncharacterized LOC100810326 protein LIKE EARLY STARVATION, chloroplastic uncharacterized LOC7473438 uncharacterized LOC25482941 protein LIKE EARLY STARVATION, chloroplastic uncharacterized LOC102584633 protein LIKE EARLY STARVATION, chloroplastic-like protein LIKE EARLY STARVATION, chloroplastic protein LIKE EARLY STARVATION, chloroplastic uncharacterized LOC103654538 uncharacterized LOC123092058 uncharacterized LOC123448536 uncharacterized LOC8062676 uncharacterized LOC100825548
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 7
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit00030 Pentose phosphate pathway 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00061 Fatty acid biosynthesis 7
sly01212 Fatty acid metabolism 7
sly01240 Biosynthesis of cofactors 5
sly00620 Pyruvate metabolism 4
sly01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot01230 Biosynthesis of amino acids 2
sot00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 11
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824742 103834190 106453653 106453733 107929148 107928566 102630703 100810326 100256346 7473438 25482941 101257179 102584633 107786429 107806834 4350800 103654538 123092058 123448536 8062676 100825548
The preparation time of this page was 0.1 [sec].