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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AGP20   arabinogalactan protein 20 
 ath-u.5   AGP20   arabinogalactan protein 20 
 ath-m.9   AGP20   arabinogalactan protein 20 
 ath-e.2   AGP20   arabinogalactan protein 20 
 ath-m.4.bio   AGP20   arabinogalactan protein 20 
 ath-m.4.hor   AGP20   arabinogalactan protein 20 
 ath-m.4.lig   AGP20   arabinogalactan protein 20 
 ath-m.4.str   AGP20   arabinogalactan protein 20 
 ath-m.4.tis   AGP20   arabinogalactan protein 20 
 ath-u.5   AGP16   arabinogalactan protein 16 
 ath-u.5   AGP41   arabinogalactan protein 41 
 bra-r.6   103866478   arabinogalactan protein 16 
 bra-r.6   103858210   arabinogalactan protein 16 
 bna-r.1   106454430   arabinogalactan protein 16 
 bna-r.1   106348285   arabinogalactan protein 41-like 
 bna-r.1   106364072   arabinogalactan protein 41 
 ghi-r.1   107948193   arabinogalactan protein 20 
 ghi-r.1   107947106   arabinogalactan protein 41 
 ghi-r.1   107947105   arabinogalactan protein 41 
 cit-r.1   102622662   arabinogalactan protein 41-like 
 gma-u.5   100526942   arabinogalactan protein 
 gma-u.5   100306137   arabinogalactan peptide 
 gma-u.5   100306086   uncharacterized LOC100306086 
 vvi-u.5   100250031   arabinogalactan protein 20 
 ppo-u.5   7492758   arabinogalactan protein 20 
 ppo-u.5   7485215   arabinogalactan protein 41 
 mtr-u.5   25502153   arabinogalactan protein 41 
 mtr-u.5   25482377   arabinogalactan protein 41 
 sly-u.5   109119991   arabinogalactan protein 16-like 
 sot-r.1   107062027   arabinogalactan peptide 16 
 nta-r.1   107759176   arabinogalactan protein 20 
 nta-r.1   107826928   arabinogalactan protein 20-like 
 osa-u.5   4328951   arabinogalactan protein 20 
 osa-u.5   4338117   arabinogalactan protein 16 
 zma-u.5   100282009   AGP16 
 zma-u.5   100194381   Arabinogalactan peptide 20 
 zma-u.5   100303848   AGP16 
 tae-r.2   123105738   arabinogalactan protein 16 
 hvu-r.1   123426578   arabinogalactan protein 16-like 
 sbi-r.1   8059060   arabinogalactan peptide 22 
 sbi-r.1   8066613   arabinogalactan peptide 16 
 bdi-r.1   100839186   arabinogalactan peptide 16-like 
 bdi-r.1   100842547   arabinogalactan peptide 16 

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Top 50 coexpressed genes to AGP20 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGP20 (ath-r.7 coexpression data)

CoexMap"825337"


athAGP20 | Entrez gene ID : 825337    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 2 3 3 1 3 1 2 2 1 1 2 2 3 1 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0016020 [list] [network] membrane  (3740 genes)  TAS  
GO MF
Protein NP_191723.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 3,  vacu 2  (predict for NP_191723.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_191723.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AGP20
ath-u.5
for
AGP20
ath-m.9
for
AGP20
ath-e.2
for
AGP20
ath-m.4.bio
for
AGP20
ath-m.4.hor
for
AGP20
ath-m.4.lig
for
AGP20
ath-m.4.str
for
AGP20
ath-m.4.tis
for
AGP20
ath-u.5
for
AGP16
ath-u.5
for
AGP41
bra-r.6
for
103866478
bra-r.6
for
103858210
bna-r.1
for
106454430
bna-r.1
for
106348285
bna-r.1
for
106364072
ghi-r.1
for
107948193
ghi-r.1
for
107947106
ghi-r.1
for
107947105
cit-r.1
for
102622662
gma-u.5
for
100526942
gma-u.5
for
100306137
gma-u.5
for
100306086
vvi-u.5
for
100250031
ppo-u.5
for
7492758
ppo-u.5
for
7485215
mtr-u.5
for
25502153
mtr-u.5
for
25482377
sly-u.5
for
109119991
sot-r.1
for
107062027
nta-r.1
for
107759176
nta-r.1
for
107826928
osa-u.5
for
4328951
osa-u.5
for
4338117
zma-u.5
for
100282009
zma-u.5
for
100194381
zma-u.5
for
100303848
tae-r.2
for
123105738
hvu-r.1
for
123426578
sbi-r.1
for
8059060
sbi-r.1
for
8066613
bdi-r.1
for
100839186
bdi-r.1
for
100842547


Ortholog ID: 1738
Species ath ath ath bra bra bra bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma zma tae tae hvu sbi sbi bdi bdi
Symbol AGP20 AGP16 AGP41 LOC103866478 LOC103858210 LOC103862818 LOC106414185 LOC125608250 LOC107924525 LOC107896102 LOC107952937 LOC102622662 LOC100305980 LOC100817755 LOC100775980 LOC100250031 LOC7485215 LOC7472719 LOC25502153 LOC25482377 LOC109119991 LOC107062027 LOC107759176 LOC107826928 LOC4328951 LOC4338117 LOC100282009 LOC100194381 LOC100284120 LOC123180647 LOC123147875 LOC123426578 LOC8059060 LOC8066613 LOC100839186 LOC100842547
Function* arabinogalactan protein 20 arabinogalactan protein 16 arabinogalactan protein 41 arabinogalactan protein 16 arabinogalactan protein 16 arabinogalactan protein 20 arabinogalactan protein 41-like arabinogalactan protein 20-like arabinogalactan protein 20 arabinogalactan protein 20 arabinogalactan protein 20 arabinogalactan protein 41-like uncharacterized LOC100305980 arabinogalactan protein 41 arabinogalactan protein 22 arabinogalactan protein 20 arabinogalactan protein 41 arabinogalactan protein 41 arabinogalactan protein 41 arabinogalactan protein 41 arabinogalactan protein 16-like arabinogalactan peptide 16 arabinogalactan protein 20 arabinogalactan protein 20-like arabinogalactan protein 20 arabinogalactan protein 16 AGP16 Arabinogalactan peptide 20 AGP16 arabinogalactan protein 16 arabinogalactan protein 20 arabinogalactan protein 16-like arabinogalactan peptide 22 arabinogalactan peptide 16 arabinogalactan peptide 16-like arabinogalactan peptide 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 3
ath00750 Vitamin B6 metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04142 Lysosome 3
cit04145 Phagosome 3
cit00071 Fatty acid degradation 3
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma00380 Tryptophan metabolism 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 8
sot00860 Porphyrin metabolism 4
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825337 819241 2745995 103866478 103858210 103862818 106414185 125608250 107924525 107896102 107952937 102622662 100305980 100817755 100775980 100250031 7485215 7472719 25502153 25482377 109119991 107062027 107759176 107826928 4328951 4338117 100282009 100194381 100284120 123180647 123147875 123426578 8059060 8066613 100839186 100842547
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