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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   GASA3   GAST1 protein homolog 3 
 ath-u.5   GASA3   GAST1 protein homolog 3 
 ath-m.9   GASA3   GAST1 protein homolog 3 
 ath-e.2   GASA3   GAST1 protein homolog 3 
 ath-m.4.bio   GASA3   GAST1 protein homolog 3 
 ath-m.4.hor   GASA3   GAST1 protein homolog 3 
 ath-m.4.lig   GASA3   GAST1 protein homolog 3 
 ath-m.4.str   GASA3   GAST1 protein homolog 3 
 ath-m.4.tis   GASA3   GAST1 protein homolog 3 
 ath-u.5   GASA2   GAST1 protein homolog 2 
 ath-u.5   GASA1   GAST1 protein homolog 1 
 bra-r.6   103837920   gibberellin-regulated protein 1 
 bna-r.1   125598049   gibberellin-regulated protein 1-like 
 bna-r.1   106374684   gibberellin-regulated protein 1 
 bna-r.1   106423462   gibberellin-regulated protein 3 
 ghi-r.1   107905506   gibberellin-regulated protein 1 
 ghi-r.1   107938108   gibberellin-regulated protein 1 
 cit-r.1   102628717   gibberellin-regulated protein 1 
 cit-r.1   102628220   snakin-2 
 gma-u.5   GASA28   gibberellin-regulated protein 28 
 gma-u.5   GASA24   gibberellin-regulated protein 24 
 vvi-u.5   100266028   snakin-2 
 ppo-u.5   7493964   gibberellin-regulated protein 11 
 ppo-u.5   7493965   gibberellin-regulated protein 1 
 mtr-u.5   11428882   gibberellin-regulated protein 11 
 mtr-u.5   11406624   gibberellin-regulated protein 11 
 sly-u.5   SN2   snakin-2 
 sly-u.5   101259800   cypmaclein 
 sly-u.5   101248656   cypmaclein-like 
 sot-r.1   102599648   gibberellin-regulated protein 11-like 
 sot-r.1   102582131   snakin-2-like 
 sot-r.1   102589718   gibberellin-regulated protein 11-like 
 nta-r.1   107785374   snakin-2-like 
 nta-r.1   107771705   snakin-2 
 nta-r.1   107815936   gibberellin-regulated protein 11 
 osa-u.5   4338883   cypmaclein 
 zma-u.5   100286041   uncharacterized LOC100286041 
 zma-u.5   100286242   uncharacterized LOC100286242 

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Top 50 coexpressed genes to GASA3 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GASA3 (ath-r.7 coexpression data)

CoexMap"826545"


athGASA3 | Entrez gene ID : 826545      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae bdi sbi hvu cre
Paralog 11 1 3 2 2 2 1 2 2 3 3 3 1 2 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009739 [list] [network] response to gibberellin  (125 genes)  TAS  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
Protein NP_192698.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 7,  vacu 3  (predict for NP_192698.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_192698.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
GASA3
ath-u.5
for
GASA3
ath-m.9
for
GASA3
ath-e.2
for
GASA3
ath-m.4.bio
for
GASA3
ath-m.4.hor
for
GASA3
ath-m.4.lig
for
GASA3
ath-m.4.str
for
GASA3
ath-m.4.tis
for
GASA3
ath-u.5
for
GASA2
ath-u.5
for
GASA1
bra-r.6
for
103837920
bna-r.1
for
125598049
bna-r.1
for
106374684
bna-r.1
for
106423462
ghi-r.1
for
107905506
ghi-r.1
for
107938108
cit-r.1
for
102628717
cit-r.1
for
102628220
gma-u.5
for
GASA28
gma-u.5
for
GASA24
vvi-u.5
for
100266028
ppo-u.5
for
7493964
ppo-u.5
for
7493965
mtr-u.5
for
11428882
mtr-u.5
for
11406624
sly-u.5
for
SN2
sly-u.5
for
101259800
sly-u.5
for
101248656
sot-r.1
for
102599648
sot-r.1
for
102582131
sot-r.1
for
102589718
nta-r.1
for
107785374
nta-r.1
for
107771705
nta-r.1
for
107815936
osa-u.5
for
4338883
zma-u.5
for
100286041
zma-u.5
for
100286242


Ortholog ID: 1255
Species ath ath ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma tae
Symbol GASA3 GASA2 GASA1 LOC103852979 LOC103830639 LOC106374684 LOC106433346 LOC106425883 LOC107938108 LOC107938126 LOC107940708 LOC102628717 LOC102628220 GASA4 GASA37 LOC100266028 LOC7493964 LOC7493965 LOC11428882 LOC11406624 LOC11412608 SN2 LOC101259800 LOC101248656 LOC102582131 LOC102589718 LOC102588973 LOC107815936 LOC107813154 LOC107803188 LOC4338883 LOC100286041 LOC100286242 LOC123148837
Function* GAST1 protein homolog 3 GAST1 protein homolog 2 GAST1 protein homolog 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1 gibberellin-regulated protein 1-like gibberellin-regulated protein 1 gibberellin-regulated protein 11 gibberellin-regulated protein 1 gibberellin-regulated protein 1 snakin-2 gibberellin-regulated protein 4 gibberellin-regulated protein 37 snakin-2 gibberellin-regulated protein 11 gibberellin-regulated protein 1 gibberellin-regulated protein 11 gibberellin-regulated protein 11 snakin-2 snakin-2 cypmaclein cypmaclein-like snakin-2-like gibberellin-regulated protein 11-like gibberellin-regulated protein 1-like gibberellin-regulated protein 11 gibberellin-regulated protein 1-like snakin-2 cypmaclein uncharacterized LOC100286041 uncharacterized LOC100286242 cypmaclein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00330 Arginine and proline metabolism 2
cit00906 Carotenoid biosynthesis 2
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta00010 Glycolysis / Gluconeogenesis 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00402 Benzoxazinoid biosynthesis 6
tae00999 Biosynthesis of various plant secondary metabolites 6
tae00901 Indole alkaloid biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826545 826546 843908 103852979 103830639 106374684 106433346 106425883 107938108 107938126 107940708 102628717 102628220 100795140 102660133 100266028 7493964 7493965 11428882 11406624 11412608 101245301 101259800 101248656 102582131 102589718 102588973 107815936 107813154 107803188 4338883 100286041 100286242 123148837
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