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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-u.5   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.9   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-e.2   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.4.bio   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.4.hor   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.4.lig   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.4.str   SETH5   transducin family protein / WD-40 repeat family protein 
 ath-m.4.tis   SETH5   transducin family protein / WD-40 repeat family protein 
 bra-r.6   103836844   vacuolar protein sorting-associated protein 8 homolog 
 bna-r.1   106436321   vacuolar protein sorting-associated protein 8 homolog 
 bna-r.1   106426639   vacuolar protein sorting-associated protein 8 homolog 
 ghi-r.1   107945880   vacuolar protein sorting-associated protein 8 homolog 
 ghi-r.1   107923378   vacuolar protein sorting-associated protein 8 homolog 
 cit-r.1   102621344   uncharacterized LOC102621344 
 gma-u.5   100780869   vacuolar protein sorting-associated protein 8 homolog 
 gma-u.5   100785710   vacuolar protein sorting-associated protein 8 homolog 
 vvi-u.5   100242137   uncharacterized LOC100242137 
 ppo-u.5   7455362   uncharacterized LOC7455362 
 mtr-u.5   25500615   vacuolar protein sorting-associated protein 8 homolog 
 sly-u.5   101260644   uncharacterized LOC101260644 
 sot-r.1   102585973   vacuolar protein sorting-associated protein 8 homolog 
 nta-r.1   107824789   uncharacterized LOC107824789 
 nta-r.1   107759344   uncharacterized LOC107759344 
 nta-r.1   142161740   uncharacterized LOC142161740 
 osa-u.5   4328144   uncharacterized LOC4328144 
 zma-u.5   100193154   uncharacterized LOC100193154 
 tae-r.2   123143484   vacuolar protein sorting-associated protein 8 homolog 
 hvu-r.1   123406036   uncharacterized LOC123406036 
 hvu-r.1   123409765   vacuolar protein sorting-associated protein 8 homolog 
 sbi-r.1   8055060   uncharacterized LOC8055060 
 bdi-r.1   100827891   vacuolar protein sorting-associated protein 8 homolog 
 cre-r.1   CHLRE_13g606350v5   uncharacterized protein 

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Top 50 coexpressed genes to SETH5 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SETH5 (ath-r.7 coexpression data)

CoexMap"828005"


athSETH5 | Entrez gene ID : 828005      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 3 1 1 1 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO CC
GO MF
Protein NP_001329262.1 [sequence] [blastp]
NP_567189.6 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001329262.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1  (predict for NP_567189.6)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001329262.1)
other 7,  chlo 3  (predict for NP_567189.6)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
SETH5
ath-u.5
for
SETH5
ath-m.9
for
SETH5
ath-e.2
for
SETH5
ath-m.4.bio
for
SETH5
ath-m.4.hor
for
SETH5
ath-m.4.lig
for
SETH5
ath-m.4.str
for
SETH5
ath-m.4.tis
for
SETH5
bra-r.6
for
103836844
bna-r.1
for
106436321
bna-r.1
for
106426639
ghi-r.1
for
107945880
ghi-r.1
for
107923378
cit-r.1
for
102621344
gma-u.5
for
100780869
gma-u.5
for
100785710
vvi-u.5
for
100242137
ppo-u.5
for
7455362
mtr-u.5
for
25500615
sly-u.5
for
101260644
sot-r.1
for
102585973
nta-r.1
for
107824789
nta-r.1
for
107759344
nta-r.1
for
142161740
osa-u.5
for
4328144
zma-u.5
for
100193154
tae-r.2
for
123143484
hvu-r.1
for
123406036
hvu-r.1
for
123409765
sbi-r.1
for
8055060
bdi-r.1
for
100827891
cre-r.1
for
CHLRE_13g606350v5


Ortholog ID: 7665
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol SETH5 LOC103836844 LOC106436321 LOC106426639 LOC107945880 LOC107923378 LOC102621344 LOC100780869 LOC100785710 LOC100242137 LOC7455362 LOC25500615 LOC101260644 LOC102585973 LOC107824789 LOC107759344 LOC142161740 LOC4328144 LOC100193154 LOC123143484 LOC123131964 LOC123136027 LOC123406036 LOC123409765 LOC8055060 LOC100827891 CHLRE_13g606350v5
Function* transducin family protein / WD-40 repeat family protein vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC102621344 vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC100242137 uncharacterized LOC7455362 vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC101260644 vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC107824789 uncharacterized LOC107759344 uncharacterized LOC142161740 uncharacterized LOC4328144 uncharacterized LOC100193154 vacuolar protein sorting-associated protein 8 homolog vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC123136027 uncharacterized LOC123406036 vacuolar protein sorting-associated protein 8 homolog uncharacterized LOC8055060 vacuolar protein sorting-associated protein 8 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04148 Efferocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 5
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 4
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828005 103836844 106436321 106426639 107945880 107923378 102621344 100780869 100785710 100242137 7455362 25500615 101260644 102585973 107824789 107759344 142161740 4328144 100193154 123143484 123131964 123136027 123406036 123409765 8055060 100827891 66056122
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