ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-r.7	AT4G31360	selenium binding protein
ath-u.5	AT4G31360	selenium binding protein
ath-m.9	AT4G31360	selenium binding protein
ath-e.2	AT4G31360	selenium binding protein
ath-m.4.bio	AT4G31360	selenium binding protein
ath-m.4.hor	AT4G31360	selenium binding protein
ath-m.4.lig	AT4G31360	selenium binding protein
ath-m.4.str	AT4G31360	selenium binding protein
ath-m.4.tis	AT4G31360	selenium binding protein
ath-u.5	AT2G24440	selenium binding protein
bra-r.6	103851913	selenoprotein H
bra-r.6	103864553	transcription initiation factor TFIID subunit 11
bna-r.1	106375427	selenoprotein H
bna-r.1	106448623	pheromone-processing carboxypeptidase KEX1
bna-r.1	106446644	selenoprotein H
ghi-r.1	107902797	selenoprotein H
ghi-r.1	107937910	selenoprotein H
cit-r.1	102611303	uncharacterized LOC102611303
gma-u.5	100818149	selenoprotein H
gma-u.5	100788694	uncharacterized LOC100788694
vvi-u.5	100261165	uncharacterized LOC100261165
ppo-u.5	18100770	uncharacterized LOC18100770
ppo-u.5	18107587	uncharacterized LOC18107587
sly-u.5	101264044	uncharacterized LOC101264044
sot-r.1	102587853	selenoprotein H-like
nta-r.1	107803110	uncharacterized LOC107803110
osa-u.5	4351209	uncharacterized LOC4351209
zma-u.5	100283075	selT/selW/selH selenoprotein domain containing protein
tae-r.2	123086267	uncharacterized LOC123086267
tae-r.2	123089128	selenoprotein H
tae-r.2	123096798	selenoprotein H
hvu-r.1	123448275	selenoprotein H
sbi-r.1	8057251	selenoprotein H
bdi-r.1	100844744	selenoprotein H
bdi-r.1	100844615	selenoprotein H
cre-r.1	CHLRE_02g120301v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_194864.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, mito 3, cyto 1, cyto_mito 1, mito_plas 1

(predict for NP_194864.2)

Subcellular
localization
TargetP

chlo 6

(predict for NP_194864.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-r.7 for AT4G31360	ath-u.5 for AT4G31360	ath-m.9 for AT4G31360	ath-e.2 for AT4G31360	ath-m.4.bio for AT4G31360	ath-m.4.hor for AT4G31360	ath-m.4.lig for AT4G31360	ath-m.4.str for AT4G31360	ath-m.4.tis for AT4G31360	ath-u.5 for AT2G24440	bra-r.6 for 103851913	bra-r.6 for 103864553	bna-r.1 for 106375427	bna-r.1 for 106448623	bna-r.1 for 106446644	ghi-r.1 for 107902797	ghi-r.1 for 107937910	cit-r.1 for 102611303	gma-u.5 for 100818149	gma-u.5 for 100788694	vvi-u.5 for 100261165	ppo-u.5 for 18100770	ppo-u.5 for 18107587	sly-u.5 for 101264044	sot-r.1 for 102587853	nta-r.1 for 107803110	osa-u.5 for 4351209	zma-u.5 for 100283075	tae-r.2 for 123086267	tae-r.2 for 123089128	tae-r.2 for 123096798	hvu-r.1 for 123448275	sbi-r.1 for 8057251	bdi-r.1 for 100844744	bdi-r.1 for 100844615	cre-r.1 for CHLRE_02g120301v5

Ortholog

Ortholog ID: 5064

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

selenium binding protein

selenoprotein H

uncharacterized LOC102611303

selenoprotein H

uncharacterized LOC100788694

uncharacterized LOC100261165

uncharacterized LOC18100770

uncharacterized LOC18107587

uncharacterized LOC101264044

selenoprotein H-like

uncharacterized LOC107803110

uncharacterized LOC4351209

selT/selW/selH selenoprotein domain containing protein

uncharacterized LOC123086267

selenoprotein H

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	6
sly03030	DNA replication	3
sly03420	Nucleotide excision repair	2
sly03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2
sot04016	MAPK signaling pathway - plant	2
sot04070	Phosphatidylinositol signaling system	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	6
nta00240	Pyrimidine metabolism	6
nta00480	Glutathione metabolism	6
nta01232	Nucleotide metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	10
osa00510	N-Glycan biosynthesis	8
osa00513	Various types of N-glycan biosynthesis	8
osa03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	7
zma03420	Nucleotide excision repair	3
zma03430	Mismatch repair	3
zma03440	Homologous recombination	2
zma03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	4
tae03420	Nucleotide excision repair	4
tae03430	Mismatch repair	4
tae03440	Homologous recombination	4
tae03460	Fanconi anemia pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	5
tae03420	Nucleotide excision repair	3
tae03030	DNA replication	3
tae03010	Ribosome	2
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	3
sbi00270	Cysteine and methionine metabolism	2
sbi03030	DNA replication	2
sbi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	3
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	3
bdi03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

829263

816980

103851913

106375427

106446644

106354724

107902797

107937910

102611303

100818149

100788694

100261165

18100770

18107587

101264044

102587853

107803110

4351209

100283075

123086267

123096798

123448275

8057251

100844615

100840050

5727973

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G31360 (ath-r.7 coexpression data)

Top 50 enrichment test to AT4G31360 (ath-r.7 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	mtr
Paralog	10	2	3	2	1	2	1	2	1	1	1	1	1	3	1	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G31360 (ath-r.7 coexpression data)

Top 50 enrichment test to AT4G31360 (ath-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**