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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.9  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.bio  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.hor  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.lig  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.str  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.tis  AT5G04060  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5  AT3G10200  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6  103847333  probable methyltransferase PMT7 
 bna-r.1  106372669  probable methyltransferase PMT7 
 bna-r.1  106372517  probable methyltransferase PMT7 
 bna-r.1  106348787  probable methyltransferase PMT6 
 ghi-r.1  107891555  probable methyltransferase PMT7 
 ghi-r.1  107958055  probable methyltransferase PMT7 
 cit-r.1  102607611  probable methyltransferase PMT6 
 gma-u.5  100789198  probable methyltransferase PMT7 
 gma-u.5  100800388  probable methyltransferase PMT6 
 vvi-u.5  100252113  probable methyltransferase PMT7 
 ppo-u.5  7496099  probable methyltransferase PMT6 
 mtr-u.5  25483283  probable methyltransferase PMT6 
 sly-u.5  101265688  probable methyltransferase PMT6 
 sot-r.1  102598135  probable methyltransferase PMT7 
 sot-r.1  102596444  probable methyltransferase PMT6 
 sot-r.1  102579536  probable methyltransferase PMT7 
 nta-r.1  107821126  putative methyltransferase PMT7 
 nta-r.1  107790833  putative methyltransferase PMT7 
 nta-r.1  107779194  putative methyltransferase PMT7 
 osa-u.5  4338624  probable methyltransferase PMT7 
 zma-u.5  100285434  ankyrin like protein 
 tae-r.2  123053394  probable methyltransferase PMT7 
 tae-r.2  123181833  probable methyltransferase PMT7 
 tae-r.2  123130470  probable methyltransferase PMT7 
 hvu-r.1  123440048  probable methyltransferase PMT7 
 sbi-r.1  110430398  probable methyltransferase PMT7 
 bdi-r.1  100843966  probable methyltransferase PMT7 

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Top 50 coexpressed genes to AT5G04060 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G04060 (ath-r.7 coexpression data)

CoexMap"830285"


athAT5G04060 | Entrez gene ID : 830285
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 3 2 1 2 1 1 1 1 3 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO MF
Protein NP_196026.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  plas 2,  vacu 2,  cyto_plas 2,  chlo 1,  cyto_nucl 1,  nucl_plas 1,  cyto_pero 1  (predict for NP_196026.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_196026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G04060


ath-u.5
for
AT5G04060


ath-m.9
for
AT5G04060


ath-e.2
for
AT5G04060


ath-m.4.bio
for
AT5G04060


ath-m.4.hor
for
AT5G04060


ath-m.4.lig
for
AT5G04060


ath-m.4.str
for
AT5G04060


ath-m.4.tis
for
AT5G04060


ath-u.5
for
AT3G10200


bra-r.6
for
103847333


bna-r.1
for
106372669


bna-r.1
for
106372517


bna-r.1
for
106348787


ghi-r.1
for
107891555


ghi-r.1
for
107958055


cit-r.1
for
102607611


gma-u.5
for
100789198


gma-u.5
for
100800388


vvi-u.5
for
100252113


ppo-u.5
for
7496099


mtr-u.5
for
25483283


sly-u.5
for
101265688


sot-r.1
for
102598135


sot-r.1
for
102596444


sot-r.1
for
102579536


nta-r.1
for
107821126


nta-r.1
for
107790833


nta-r.1
for
107779194


osa-u.5
for
4338624


zma-u.5
for
100285434


tae-r.2
for
123053394


tae-r.2
for
123181833


tae-r.2
for
123130470


hvu-r.1
for
123440048


sbi-r.1
for
110430398


bdi-r.1
for
100843966



Ortholog ID: 7203
Species ath ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G04060 AT3G10200 LOC103847333 LOC106372669 LOC106372517 LOC125594329 LOC107891555 LOC107958055 LOC102607611 LOC100789198 LOC100800388 LOC100252113 LOC7496099 LOC25483283 LOC101265688 LOC102598135 LOC102596444 LOC102579536 LOC107821126 LOC107790833 LOC107779194 LOC4338624 LOC100285434 LOC123053394 LOC123181833 LOC123130470 LOC123440048 LOC110430398 LOC100843966
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT6 probable methyltransferase PMT6 probable methyltransferase PMT7 probable methyltransferase PMT6 probable methyltransferase PMT7 putative methyltransferase PMT7 putative methyltransferase PMT7 putative methyltransferase PMT7 probable methyltransferase PMT7 ankyrin like protein probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7 probable methyltransferase PMT7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
tae04144 Endocytosis 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830285 820182 103847333 106372669 106372517 125594329 107891555 107958055 102607611 100789198 100800388 100252113 7496099 25483283 101265688 102598135 102596444 102579536 107821126 107790833 107779194 4338624 100285434 123053394 123181833 123130470 123440048 110430398 100843966
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