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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G06540   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103846994   pentatricopeptide repeat-containing protein At5g06540 
 bna-r.1   106375465   pentatricopeptide repeat-containing protein At5g06540-like 
 bna-r.1   106419300   pentatricopeptide repeat-containing protein At5g06540-like 
 vvi-u.5   100261634   pentatricopeptide repeat-containing protein At5g06540 
 mtr-u.5   25499532   pentatricopeptide repeat-containing protein At5g06540 

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Top 50 coexpressed genes to AT5G06540 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G06540 (ath-r.7 coexpression data)

CoexMap"830542"


athAT5G06540 | Entrez gene ID : 830542      
Species ath bra bna vvi mtr sbi osa gma sot sly cit tae hvu ppo ghi zma cre nta bdi
Paralog 9 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_196272.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_196272.1)
Subcellular
localization
TargetP
scret 4,  mito 4,  other 3  (predict for NP_196272.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G06540
ath-u.5
for
AT5G06540
ath-m.9
for
AT5G06540
ath-e.2
for
AT5G06540
ath-m.4.bio
for
AT5G06540
ath-m.4.hor
for
AT5G06540
ath-m.4.lig
for
AT5G06540
ath-m.4.str
for
AT5G06540
ath-m.4.tis
for
AT5G06540
bra-r.6
for
103846994
bna-r.1
for
106375465
bna-r.1
for
106419300
vvi-u.5
for
100261634
mtr-u.5
for
25499532


Ortholog ID: 14757
Species ath bra bna bna vvi mtr
Symbol AT5G06540 LOC103846994 LOC106375465 LOC106419300 LOC100261634 LOC25499532
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540-like pentatricopeptide repeat-containing protein At5g06540-like pentatricopeptide repeat-containing protein At5g06540 pentatricopeptide repeat-containing protein At5g06540
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830542 103846994 106375465 106419300 100261634 25499532
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