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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   EMF1   embryonic flower 1 (EMF1) 
 ath-u.5   EMF1   embryonic flower 1 (EMF1) 
 ath-m.9   EMF1   embryonic flower 1 (EMF1) 
 ath-e.2   EMF1   embryonic flower 1 (EMF1) 
 ath-m.4.bio   EMF1   embryonic flower 1 (EMF1) 
 ath-m.4.hor   EMF1   embryonic flower 1 (EMF1) 
 ath-m.4.lig   EMF1   embryonic flower 1 (EMF1) 
 ath-m.4.str   EMF1   embryonic flower 1 (EMF1) 
 ath-m.4.tis   EMF1   embryonic flower 1 (EMF1) 
 bra-r.6   103855917   protein EMBRYONIC FLOWER 1 
 bra-r.6   103850776   protein EMBRYONIC FLOWER 1 
 bna-r.1   106429932   protein EMBRYONIC FLOWER 1 
 bna-r.1   106383528   protein EMBRYONIC FLOWER 1-like 
 bna-r.1   106383024   protein EMBRYONIC FLOWER 1-like 
 ghi-r.1   107953837   protein EMBRYONIC FLOWER 1 
 ghi-r.1   107953838   protein EMBRYONIC FLOWER 1 
 ghi-r.1   107900517   protein EMBRYONIC FLOWER 1 
 cit-r.1   102617079   protein EMBRYONIC FLOWER 1 
 gma-u.5   100811989   protein EMBRYONIC FLOWER 1 
 gma-u.5   100813480   protein EMBRYONIC FLOWER 1 
 vvi-u.5   104878998   protein EMBRYONIC FLOWER 1 
 ppo-u.5   7458970   protein EMBRYONIC FLOWER 1 
 ppo-u.5   7471536   protein EMBRYONIC FLOWER 1 
 mtr-u.5   25490113   protein EMBRYONIC FLOWER 1 
 sly-u.5   101255661   protein EMBRYONIC FLOWER 1 
 sot-r.1   102585198   protein EMBRYONIC FLOWER 1 
 nta-r.1   107788728   protein EMBRYONIC FLOWER 1 
 nta-r.1   107811396   protein EMBRYONIC FLOWER 1-like 

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Top 50 coexpressed genes to EMF1 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMF1 (ath-r.7 coexpression data)

CoexMap"831025"


athEMF1 | Entrez gene ID : 831025      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta sbi osa tae hvu zma cre bdi
Paralog 9 2 3 3 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045815 [list] [network] transcription initiation-coupled chromatin remodeling  (6 genes)  IMP  
GO:0010022 [list] [network] meristem determinacy  (25 genes)  IMP  
GO:1901000 [list] [network] regulation of response to salt stress  (44 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0042538 [list] [network] hyperosmotic salinity response  (57 genes)  IMP  
GO:0045814 [list] [network] negative regulation of gene expression, epigenetic  (117 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (163 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IDA  
GO:0048367 [list] [network] shoot system development  (800 genes)  IGI IMP  
GO:0009791 [list] [network] post-embryonic development  (1579 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (37 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330242.1 [sequence] [blastp]
NP_001330243.1 [sequence] [blastp]
NP_196714.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001330242.1)
nucl 10  (predict for NP_001330243.1)
nucl 10  (predict for NP_196714.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_001330242.1)
other 4,  chlo 3  (predict for NP_001330243.1)
other 4,  chlo 3  (predict for NP_196714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
EMF1
ath-u.5
for
EMF1
ath-m.9
for
EMF1
ath-e.2
for
EMF1
ath-m.4.bio
for
EMF1
ath-m.4.hor
for
EMF1
ath-m.4.lig
for
EMF1
ath-m.4.str
for
EMF1
ath-m.4.tis
for
EMF1
bra-r.6
for
103855917
bra-r.6
for
103850776
bna-r.1
for
106429932
bna-r.1
for
106383528
bna-r.1
for
106383024
ghi-r.1
for
107953837
ghi-r.1
for
107953838
ghi-r.1
for
107900517
cit-r.1
for
102617079
gma-u.5
for
100811989
gma-u.5
for
100813480
vvi-u.5
for
104878998
ppo-u.5
for
7458970
ppo-u.5
for
7471536
mtr-u.5
for
25490113
sly-u.5
for
101255661
sot-r.1
for
102585198
nta-r.1
for
107788728
nta-r.1
for
107811396


Ortholog ID: 7712
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta
Symbol EMF1 LOC103855917 LOC103850776 LOC106383528 LOC106348552 LOC106358528 LOC107953837 LOC107900517 LOC107900515 LOC102617079 LOC100811989 LOC100813480 LOC104878998 LOC7458970 LOC7471536 LOC25490113 LOC101255661 LOC102585198 LOC107788728 LOC107811396
Function* embryonic flower 1 (EMF1) protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1-like protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1-like protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1 protein EMBRYONIC FLOWER 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 3
nta04070 Phosphatidylinositol signaling system 3
nta04145 Phagosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831025 103855917 103850776 106383528 106348552 106358528 107953837 107900517 107900515 102617079 100811989 100813480 104878998 7458970 7471536 25490113 101255661 102585198 107788728 107811396
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