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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   CDF1   cell growth defect factor-like protein (DUF3353) 
 ath-u.5   CDF1   cell growth defect factor-like protein (DUF3353) 
 ath-e.2   CDF1   cell growth defect factor-like protein (DUF3353) 
 ath-u.5   AT3G51140   DnaJ (DUF3353) 
 bra-r.6   103841030   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bra-r.6   103860694   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bra-r.6   103860536   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bna-r.1   106421898   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 bna-r.1   106367716   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 ghi-r.1   107926957   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 ghi-r.1   107887049   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 ghi-r.1   107945813   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 cit-r.1   102606995   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 cit-r.1   102618127   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 gma-u.5   100500163   uncharacterized LOC100500163 
 gma-u.5   100803419   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 gma-u.5   100806315   cell growth defect factor 1-like protein 
 vvi-u.5   100262799   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 vvi-u.5   100259506   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 vvi-u.5   100852880   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 ppo-u.5   7487079   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 ppo-u.5   7480164   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 mtr-u.5   11413751   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 mtr-u.5   11443629   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 sly-u.5   101267977   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 sly-u.5   101249520   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 sot-r.1   102600896   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 sot-r.1   102599146   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 nta-r.1   107784330   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 nta-r.1   107823485   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 nta-r.1   107785167   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 osa-u.5   4346927   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 osa-u.5   4345581   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 osa-u.5   4332290   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 zma-u.5   100276880   Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic 
 zma-u.5   100276143   Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic 
 zma-u.5   100193492   uncharacterized LOC100193492 
 tae-r.2   123062552   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 tae-r.2   123085321   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 tae-r.2   123085902   uncharacterized LOC123085902 
 hvu-r.1   123396561   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 hvu-r.1   123449118   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 hvu-r.1   123450017   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 sbi-r.1   8055774   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 sbi-r.1   110437011   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like 
 sbi-r.1   110433070   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bdi-r.1   100820955   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bdi-r.1   100823484   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 bdi-r.1   100831279   protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 
 cre-r.1   CHLRE_12g510850v5   uncharacterized protein 

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Top 50 coexpressed genes to CDF1 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CDF1 (ath-r.7 coexpression data)

CoexMap"832368"


athCDF1 | Entrez gene ID : 832368      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 3 2 2 2 2 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1904216 [list] [network] positive regulation of protein import into chloroplast stroma  (2 genes)  IMP  
GO:0009704 [list] [network] de-etiolation  (18 genes)  IMP  
GO:0006457 [list] [network] protein folding  (64 genes)  ISS  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  IDA  
GO:0055035 [list] [network] plastid thylakoid membrane  (322 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA IDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0044183 [list] [network] protein folding chaperone  (23 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001331796.1 [sequence] [blastp]
NP_197695.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001331796.1)
chlo 10  (predict for NP_197695.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001331796.1)
chlo 9  (predict for NP_197695.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
CDF1
ath-u.5
for
CDF1
ath-e.2
for
CDF1
ath-u.5
for
AT3G51140
bra-r.6
for
103841030
bra-r.6
for
103860694
bra-r.6
for
103860536
bna-r.1
for
106421898
bna-r.1
for
106367716
ghi-r.1
for
107926957
ghi-r.1
for
107887049
ghi-r.1
for
107945813
cit-r.1
for
102606995
cit-r.1
for
102618127
gma-u.5
for
100500163
gma-u.5
for
100803419
gma-u.5
for
100806315
vvi-u.5
for
100262799
vvi-u.5
for
100259506
vvi-u.5
for
100852880
ppo-u.5
for
7487079
ppo-u.5
for
7480164
mtr-u.5
for
11413751
mtr-u.5
for
11443629
sly-u.5
for
101267977
sly-u.5
for
101249520
sot-r.1
for
102600896
sot-r.1
for
102599146
nta-r.1
for
107784330
nta-r.1
for
107823485
nta-r.1
for
107785167
osa-u.5
for
4346927
osa-u.5
for
4345581
osa-u.5
for
4332290
zma-u.5
for
100276880
zma-u.5
for
100276143
zma-u.5
for
100193492
tae-r.2
for
123062552
tae-r.2
for
123085321
tae-r.2
for
123085902
hvu-r.1
for
123396561
hvu-r.1
for
123449118
hvu-r.1
for
123450017
sbi-r.1
for
8055774
sbi-r.1
for
110437011
sbi-r.1
for
110433070
bdi-r.1
for
100820955
bdi-r.1
for
100823484
bdi-r.1
for
100831279
cre-r.1
for
CHLRE_12g510850v5


Ortholog ID: 1984
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol CDF1 AT3G51140 LOC103841030 LOC103860694 LOC103860536 LOC106359817 LOC106434614 LOC106377270 LOC107926957 LOC107945813 LOC107949750 LOC102606995 LOC102618127 LOC100500163 LOC100803419 LOC100806315 LOC100262799 LOC100259506 LOC100852880 LOC7487079 LOC7480164 LOC11413751 LOC11443629 LOC101267977 LOC101249520 LOC102600896 LOC102599146 LOC107784330 LOC107823485 LOC107781794 LOC4346927 LOC4345581 LOC4332290 LOC100276880 LOC100276143 LOC100282903 LOC123062552 LOC123085321 LOC123121425 LOC123396561 LOC123449118 LOC123450017 LOC8055774 LOC110437011 LOC110433070 LOC100820955 LOC100823484 LOC100831279 CHLRE_12g510850v5
Function* cell growth defect factor-like protein (DUF3353) DnaJ (DUF3353) protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic uncharacterized LOC100500163 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic cell growth defect factor 1-like protein protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic dnaJ domain containing protein protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic-like protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 5
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
ghi01230 Biosynthesis of amino acids 3
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00860 Porphyrin metabolism 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03018 RNA degradation 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot03010 Ribosome 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
nta03015 mRNA surveillance pathway 2
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa01240 Biosynthesis of cofactors 5
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
zma01230 Biosynthesis of amino acids 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 4
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
cre00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832368 824278 103841030 103860694 103860536 106359817 106434614 106377270 107926957 107945813 107949750 102606995 102618127 100500163 100803419 100806315 100262799 100259506 100852880 7487079 7480164 11413751 11443629 101267977 101249520 102600896 102599146 107784330 107823485 107781794 4346927 4345581 4332290 100276880 100276143 100282903 123062552 123085321 123121425 123396561 123449118 123450017 8055774 110437011 110433070 100820955 100823484 100831279 5716574
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