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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   BIN4   double-stranded DNA binding protein 
 ath-u.5   BIN4   double-stranded DNA binding protein 
 ath-e.2   BIN4   double-stranded DNA binding protein 
 bra-r.6   103874327   DNA-binding protein BIN4 
 bna-r.1   106348485   DNA-binding protein BIN4 
 bna-r.1   106366003   DNA-binding protein BIN4-like 
 ghi-r.1   107912226   DNA-binding protein BIN4 
 ghi-r.1   107922471   DNA-binding protein BIN4 
 cit-r.1   102616246   DNA-binding protein BIN4 
 gma-u.5   106798288   uncharacterized LOC106798288 
 gma-u.5   100812582   DNA-binding protein BIN4 
 gma-u.5   100795660   DNA-binding protein BIN4 
 vvi-u.5   100252112   DNA-binding protein BIN4 
 ppo-u.5   7486704   DNA-binding protein BIN4 
 mtr-u.5   11443488   DNA-binding protein BIN4 
 sly-u.5   101256852   DNA-binding protein BIN4 
 sot-r.1   102604513   DNA-binding protein BIN4 
 nta-r.1   107779586   uncharacterized LOC107779586 
 nta-r.1   107761646   uncharacterized LOC107761646 
 osa-u.5   4328289   DNA-binding protein BIN4 
 osa-u.5   4328294   DNA-binding protein BIN4 
 zma-u.5   100273715   uncharacterized LOC100273715 
 tae-r.2   123143785   DNA-binding protein BIN4 
 tae-r.2   123136281   DNA-binding protein BIN4 
 tae-r.2   123132237   DNA-binding protein BIN4 
 hvu-r.1   123401307   DNA-binding protein BIN4 
 sbi-r.1   110435018   DNA-binding protein BIN4 
 bdi-r.1   100821932   DNA-binding protein BIN4 
 cre-r.1   CHLRE_02g105050v5   uncharacterized protein 

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Top 50 coexpressed genes to BIN4 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BIN4 (ath-r.7 coexpression data)

CoexMap"832534"


athBIN4 | Entrez gene ID : 832534      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 3 1 1 1 1 1 2 2 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030307 [list] [network] positive regulation of cell growth  (18 genes)  IMP  
GO:0042023 [list] [network] DNA endoreduplication  (21 genes)  IEA IMP  
GO:0010090 [list] [network] trichome morphogenesis  (66 genes)  IMP  
GO:0051276 [list] [network] chromosome organization  (113 genes)  IMP  
GO:0090627 [list] [network] plant epidermal cell differentiation  (198 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (800 genes)  IMP  
GO CC
GO:0009330 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex  (3 genes)  IEA IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IDA IEA  
Protein NP_001154735.1 [sequence] [blastp]
NP_001154736.1 [sequence] [blastp]
NP_001154737.1 [sequence] [blastp]
NP_001154738.1 [sequence] [blastp]
NP_001154739.1 [sequence] [blastp]
NP_001330963.1 [sequence] [blastp]
NP_001330964.1 [sequence] [blastp]
NP_001330965.1 [sequence] [blastp]
NP_001330966.1 [sequence] [blastp]
NP_001330967.1 [sequence] [blastp]
NP_001330968.1 [sequence] [blastp]
NP_197851.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154735.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154736.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154737.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001154738.1)
nucl 9,  cyto_nucl 5  (predict for NP_001154739.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330963.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330964.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330965.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330966.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001330967.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001330968.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_197851.5)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001154735.1)
other 5,  chlo 3  (predict for NP_001154736.1)
other 5,  chlo 3  (predict for NP_001154737.1)
other 5,  chlo 3  (predict for NP_001154738.1)
other 6,  chlo 3  (predict for NP_001154739.1)
other 5,  chlo 3  (predict for NP_001330963.1)
other 5,  chlo 3  (predict for NP_001330964.1)
other 5,  chlo 3  (predict for NP_001330965.1)
other 5,  chlo 3  (predict for NP_001330966.1)
other 5,  chlo 3  (predict for NP_001330967.1)
other 5,  chlo 3  (predict for NP_001330968.1)
other 5,  chlo 4  (predict for NP_197851.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
BIN4
ath-u.5
for
BIN4
ath-e.2
for
BIN4
bra-r.6
for
103874327
bna-r.1
for
106348485
bna-r.1
for
106366003
ghi-r.1
for
107912226
ghi-r.1
for
107922471
cit-r.1
for
102616246
gma-u.5
for
106798288
gma-u.5
for
100812582
gma-u.5
for
100795660
vvi-u.5
for
100252112
ppo-u.5
for
7486704
mtr-u.5
for
11443488
sly-u.5
for
101256852
sot-r.1
for
102604513
nta-r.1
for
107779586
nta-r.1
for
107761646
osa-u.5
for
4328289
osa-u.5
for
4328294
zma-u.5
for
100273715
tae-r.2
for
123143785
tae-r.2
for
123136281
tae-r.2
for
123132237
hvu-r.1
for
123401307
sbi-r.1
for
110435018
bdi-r.1
for
100821932
cre-r.1
for
CHLRE_02g105050v5


Ortholog ID: 7351
Species ath bra bna bna ghi ghi cit gma gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol BIN4 LOC103874327 LOC106366003 LOC106348427 LOC107912226 LOC107922471 LOC102616246 LOC106798288 LOC100812582 LOC100795660 LOC100252112 LOC7486704 LOC11443488 LOC101256852 LOC102604513 LOC107779586 LOC107761646 LOC4328289 LOC4328294 LOC100273715 LOC123143785 LOC123136281 LOC123132237 LOC123401307 LOC110435018 LOC100821932 CHLRE_02g105050v5
Function* double-stranded DNA binding protein DNA-binding protein BIN4 DNA-binding protein BIN4-like DNA-binding protein BIN4-like DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 uncharacterized LOC106798288 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 uncharacterized LOC107779586 uncharacterized LOC107761646 DNA-binding protein BIN4 DNA-binding protein BIN4 uncharacterized LOC100273715 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 DNA-binding protein BIN4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03410 Base excision repair 6
ath03430 Mismatch repair 4
ath03420 Nucleotide excision repair 4
ath03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832534 103874327 106366003 106348427 107912226 107922471 102616246 106798288 100812582 100795660 100252112 7486704 11443488 101256852 102604513 107779586 107761646 4328289 4328294 100273715 123143785 123136281 123132237 123401307 110435018 100821932 5725534
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