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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-u.5   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.9   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-e.2   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.4.bio   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.4.hor   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.4.lig   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.4.str   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 ath-m.4.tis   AT5G40340   Tudor/PWWP/MBT superfamily protein 
 bra-r.6   103850169   uncharacterized LOC103850169 
 bna-r.1   106405971   PWWP domain-containing protein 3-like 
 ghi-r.1   107959855   uncharacterized LOC107959855 
 ghi-r.1   107926063   uncharacterized LOC107926063 
 cit-r.1   102612327   PWWP domain-containing protein 3 
 gma-u.5   102668257   uncharacterized LOC102668257 
 gma-u.5   102667448   uncharacterized LOC102667448 
 gma-u.5   102666492   uncharacterized LOC102666492 
 vvi-u.5   100267992   PWWP domain-containing protein 6 
 ppo-u.5   7462996   PWWP domain-containing protein 3 
 mtr-u.5   25495151   uncharacterized LOC25495151 
 mtr-u.5   11425319   uncharacterized LOC11425319 
 sly-u.5   101252451   PWWP domain-containing protein 6 
 sot-r.1   102594150   uncharacterized LOC102594150 
 nta-r.1   107777791   PWWP domain-containing protein 6-like 
 nta-r.1   107813007   PWWP domain-containing protein 6 

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Top 50 coexpressed genes to AT5G40340 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G40340 (ath-r.7 coexpression data)

CoexMap"834032"


athAT5G40340 | Entrez gene ID : 834032      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta tae zma bdi osa sbi hvu cre
Paralog 9 1 1 2 1 3 1 1 2 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IGI IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP  
GO CC
GO:0035098 [list] [network] ESC/E(Z) complex  (9 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001331897.1 [sequence] [blastp]
NP_198850.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001331897.1)
nucl 10  (predict for NP_198850.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331897.1)
other 8  (predict for NP_198850.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G40340
ath-u.5
for
AT5G40340
ath-m.9
for
AT5G40340
ath-e.2
for
AT5G40340
ath-m.4.bio
for
AT5G40340
ath-m.4.hor
for
AT5G40340
ath-m.4.lig
for
AT5G40340
ath-m.4.str
for
AT5G40340
ath-m.4.tis
for
AT5G40340
bra-r.6
for
103850169
bna-r.1
for
106405971
ghi-r.1
for
107959855
ghi-r.1
for
107926063
cit-r.1
for
102612327
gma-u.5
for
102668257
gma-u.5
for
102667448
gma-u.5
for
102666492
vvi-u.5
for
100267992
ppo-u.5
for
7462996
mtr-u.5
for
25495151
mtr-u.5
for
11425319
sly-u.5
for
101252451
sot-r.1
for
102594150
nta-r.1
for
107777791
nta-r.1
for
107813007


Ortholog ID: 11326
Species ath bra bna bna ghi ghi cit gma gma gma vvi ppo mtr mtr sly sot nta nta
Symbol AT5G40340 LOC103850169 LOC106405971 LOC125588797 LOC107959855 LOC107926063 LOC102612327 LOC102668257 LOC102667448 LOC102666447 LOC100267992 LOC7462996 LOC25495151 LOC11425319 LOC101252451 LOC102594150 LOC107777791 LOC107813007
Function* Tudor/PWWP/MBT superfamily protein uncharacterized LOC103850169 PWWP domain-containing protein 3-like PWWP domain-containing protein 3-like uncharacterized LOC107959855 uncharacterized LOC107926063 PWWP domain-containing protein 3 uncharacterized LOC102668257 uncharacterized LOC102667448 uncharacterized LOC102666447 PWWP domain-containing protein 6 PWWP domain-containing protein 3 uncharacterized LOC25495151 uncharacterized LOC11425319 PWWP domain-containing protein 6 uncharacterized LOC102594150 PWWP domain-containing protein 6-like PWWP domain-containing protein 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834032 103850169 106405971 125588797 107959855 107926063 102612327 102668257 102667448 102666447 100267992 7462996 25495151 11425319 101252451 102594150 107777791 107813007
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