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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   TRM30   uncharacterized protein 
 ath-u.5   TRM30   uncharacterized protein 
 ath-e.2   TRM30   uncharacterized protein 
 bra-r.6   103839288   DNA ligase 1 
 bna-r.1   106403019   uncharacterized LOC106403019 
 bna-r.1   106435183   DNA ligase 1-like 
 ghi-r.1   107940092   uncharacterized LOC107940092 
 ghi-r.1   107960413   uncharacterized LOC107960413 
 ghi-r.1   107938925   muscle M-line assembly protein unc-89 
 cit-r.1   102611388   uncharacterized LOC102611388 
 gma-u.5   102668494   uncharacterized LOC102668494 
 gma-u.5   102661838   uncharacterized LOC102661838 
 vvi-u.5   100267647   uncharacterized LOC100267647 
 ppo-u.5   7461513   uncharacterized LOC7461513 
 ppo-u.5   18109958   uncharacterized LOC18109958 
 mtr-u.5   11406578   uncharacterized LOC11406578 
 sly-u.5   TRM30   TONNEAU1 recruiting motif 30 
 sot-r.1   102587116   uncharacterized LOC102587116 
 nta-r.1   107822364   uncharacterized LOC107822364 
 nta-r.1   107821385   uncharacterized LOC107821385 
 osa-u.5   4334289   uncharacterized LOC4334289 
 zma-u.5   100382108   uncharacterized LOC100382108 
 tae-r.2   123105196   uncharacterized LOC123105196 
 tae-r.2   123122998   FK506-binding protein 5 
 tae-r.2   123113475   uncharacterized LOC123113475 
 hvu-r.1   123452460   uncharacterized LOC123452460 
 sbi-r.1   8083947   uncharacterized LOC8083947 
 bdi-r.1   100835672   uncharacterized LOC100835672 

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Top 50 coexpressed genes to TRM30 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM30 (ath-r.7 coexpression data)

CoexMap"834280"


athTRM30 | Entrez gene ID : 834280      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001190453.1 [sequence] [blastp]
NP_001331054.1 [sequence] [blastp]
NP_199085.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001190453.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001331054.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_199085.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190453.1)
other 8  (predict for NP_001331054.1)
other 8  (predict for NP_199085.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
TRM30
ath-u.5
for
TRM30
ath-e.2
for
TRM30
bra-r.6
for
103839288
bna-r.1
for
106403019
bna-r.1
for
106435183
ghi-r.1
for
107940092
ghi-r.1
for
107960413
ghi-r.1
for
107938925
cit-r.1
for
102611388
gma-u.5
for
102668494
gma-u.5
for
102661838
vvi-u.5
for
100267647
ppo-u.5
for
7461513
ppo-u.5
for
18109958
mtr-u.5
for
11406578
sly-u.5
for
TRM30
sot-r.1
for
102587116
nta-r.1
for
107822364
nta-r.1
for
107821385
osa-u.5
for
4334289
zma-u.5
for
100382108
tae-r.2
for
123105196
tae-r.2
for
123122998
tae-r.2
for
123113475
hvu-r.1
for
123452460
sbi-r.1
for
8083947
bdi-r.1
for
100835672


Ortholog ID: 9714
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol TRM30 LOC103839288 LOC106403019 LOC106435183 LOC107940092 LOC107960413 LOC107938925 LOC102611388 LOC102668494 LOC102661838 LOC100267647 LOC7461513 LOC18109958 LOC11406578 TRM30 LOC102587116 LOC107822364 LOC107821385 LOC4334289 LOC100382108 LOC123105196 LOC123122998 LOC123113475 LOC123452460 LOC8083947 LOC100835672
Function* uncharacterized protein DNA ligase 1 uncharacterized LOC106403019 DNA ligase 1-like uncharacterized LOC107940092 uncharacterized LOC107960413 muscle M-line assembly protein unc-89 uncharacterized LOC102611388 uncharacterized LOC102668494 uncharacterized LOC102661838 uncharacterized LOC100267647 uncharacterized LOC7461513 uncharacterized LOC18109958 uncharacterized LOC11406578 TONNEAU1 recruiting motif 30 uncharacterized LOC102587116 uncharacterized LOC107822364 uncharacterized LOC107821385 uncharacterized LOC4334289 uncharacterized LOC100382108 uncharacterized LOC123105196 FK506-binding protein 5 uncharacterized LOC123113475 uncharacterized LOC123452460 uncharacterized LOC8083947 uncharacterized LOC100835672
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04517 IgSF CAM signaling 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
sbi01230 Biosynthesis of amino acids 4
sbi00360 Phenylalanine metabolism 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834280 103839288 106403019 106435183 107940092 107960413 107938925 102611388 102668494 102661838 100267647 7461513 18109958 11406578 101268101 102587116 107822364 107821385 4334289 100382108 123105196 123122998 123113475 123452460 8083947 100835672
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