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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G49540   Rab5-interacting family protein 
 ath-u.5   AT5G49540   Rab5-interacting family protein 
 ath-m.9   AT5G49540   Rab5-interacting family protein 
 ath-e.2   AT5G49540   Rab5-interacting family protein 
 ath-m.4.bio   AT5G49540   Rab5-interacting family protein 
 ath-m.4.hor   AT5G49540   Rab5-interacting family protein 
 ath-m.4.lig   AT5G49540   Rab5-interacting family protein 
 ath-m.4.str   AT5G49540   Rab5-interacting family protein 
 ath-m.4.tis   AT5G49540   Rab5-interacting family protein 
 bra-r.6   103837291   ER membrane protein complex subunit 6 
 bra-r.6   103874615   ER membrane protein complex subunit 6 
 bna-r.1   106348803   ER membrane protein complex subunit 6 
 bna-r.1   111211560   ER membrane protein complex subunit 6 
 bna-r.1   111200857   ER membrane protein complex subunit 6 
 ghi-r.1   107910563   ER membrane protein complex subunit 6 
 ghi-r.1   107896406   ER membrane protein complex subunit 6 
 ghi-r.1   121215495   ER membrane protein complex subunit 6 
 cit-r.1   102608374   uncharacterized LOC102608374 
 gma-u.5   100306269   uncharacterized LOC100306269 
 gma-u.5   100526986   uncharacterized LOC100526986 
 gma-u.5   100306572   uncharacterized LOC100306572 
 vvi-u.5   100251751   uncharacterized LOC100251751 
 ppo-u.5   7485845   uncharacterized LOC7485845 
 ppo-u.5   7485884   uncharacterized LOC7485884 
 mtr-u.5   11408789   ER membrane protein complex subunit 6 
 mtr-u.5   11424567   ER membrane protein complex subunit 6 
 sly-u.5   101268716   uncharacterized LOC101268716 
 sot-r.1   102595034   ER membrane protein complex subunit 6-like 
 sot-r.1   102604244   ER membrane protein complex subunit 6 
 nta-r.1   107796353   uncharacterized LOC107796353 
 nta-r.1   107770842   uncharacterized LOC107770842 
 osa-u.5   4324140   uncharacterized LOC4324140 
 zma-u.5   100382435   uncharacterized LOC100382435 
 zma-u.5   100383916   Rab5-interacting family protein 
 tae-r.2   123182989   ER membrane protein complex subunit 6 
 tae-r.2   123144559   ER membrane protein complex subunit 6 
 tae-r.2   123067141   ER membrane protein complex subunit 6 
 hvu-r.1   123449578   ER membrane protein complex subunit 6 
 sbi-r.1   8063558   ER membrane protein complex subunit 6 
 sbi-r.1   8063068   ER membrane protein complex subunit 6 
 bdi-r.1   100833793   ER membrane protein complex subunit 6 
 bdi-r.1   100842551   ER membrane protein complex subunit 6 
 cre-r.1   CHLRE_14g614250v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G49540 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G49540 (ath-r.7 coexpression data)

CoexMap"835015"


athAT5G49540 | Entrez gene ID : 835015      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 3 1 2 2 1 2 2 1 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0072546 [list] [network] EMC complex  (2 genes)  IEA  
GO MF
Protein NP_001331350.1 [sequence] [blastp]
NP_568710.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  golg 3,  plas 1  (predict for NP_001331350.1)
vacu 5,  golg 3,  plas 1  (predict for NP_568710.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001331350.1)
other 9  (predict for NP_568710.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G49540
ath-u.5
for
AT5G49540
ath-m.9
for
AT5G49540
ath-e.2
for
AT5G49540
ath-m.4.bio
for
AT5G49540
ath-m.4.hor
for
AT5G49540
ath-m.4.lig
for
AT5G49540
ath-m.4.str
for
AT5G49540
ath-m.4.tis
for
AT5G49540
bra-r.6
for
103837291
bra-r.6
for
103874615
bna-r.1
for
106348803
bna-r.1
for
111211560
bna-r.1
for
111200857
ghi-r.1
for
107910563
ghi-r.1
for
107896406
ghi-r.1
for
121215495
cit-r.1
for
102608374
gma-u.5
for
100306269
gma-u.5
for
100526986
gma-u.5
for
100306572
vvi-u.5
for
100251751
ppo-u.5
for
7485845
ppo-u.5
for
7485884
mtr-u.5
for
11408789
mtr-u.5
for
11424567
sly-u.5
for
101268716
sot-r.1
for
102595034
sot-r.1
for
102604244
nta-r.1
for
107796353
nta-r.1
for
107770842
osa-u.5
for
4324140
zma-u.5
for
100382435
zma-u.5
for
100383916
tae-r.2
for
123182989
tae-r.2
for
123144559
tae-r.2
for
123067141
hvu-r.1
for
123449578
sbi-r.1
for
8063558
sbi-r.1
for
8063068
bdi-r.1
for
100833793
bdi-r.1
for
100842551
cre-r.1
for
CHLRE_14g614250v5


Ortholog ID: 5593
Species ath bra bra bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol AT5G49540 LOC103837291 LOC103874615 LOC106348803 LOC111211560 LOC107910563 LOC107896406 LOC121215495 LOC102608374 LOC100306269 LOC100526986 LOC100306572 LOC100251751 LOC7485845 LOC7485884 LOC11408789 LOC11424567 LOC101268716 LOC102595034 LOC102604244 LOC107796353 LOC107770842 LOC4324140 LOC100382435 LOC100383916 LOC123182989 LOC123144559 LOC123067141 LOC123449578 LOC8063558 LOC8063068 LOC100833793 LOC100842551 CHLRE_14g614250v5
Function* Rab5-interacting family protein ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 uncharacterized LOC102608374 uncharacterized LOC100306269 uncharacterized LOC100526986 uncharacterized LOC100306572 uncharacterized LOC100251751 uncharacterized LOC7485845 uncharacterized LOC7485884 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 uncharacterized LOC101268716 ER membrane protein complex subunit 6-like ER membrane protein complex subunit 6 uncharacterized LOC107796353 uncharacterized LOC107770842 uncharacterized LOC4324140 uncharacterized LOC100382435 Rab5-interacting family protein ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 ER membrane protein complex subunit 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 4
ath00513 Various types of N-glycan biosynthesis 3
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra03040 Spliceosome 3
bra03050 Proteasome 3
bra04130 SNARE interactions in vesicular transport 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00190 Oxidative phosphorylation 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
bna03018 RNA degradation 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
ghi03060 Protein export 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
cit04144 Endocytosis 2
cit03060 Protein export 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 4
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 4
sly04141 Protein processing in endoplasmic reticulum 4
sly00513 Various types of N-glycan biosynthesis 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00230 Purine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 2
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 5
tae00190 Oxidative phosphorylation 3
tae04142 Lysosome 3
tae04145 Phagosome 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04141 Protein processing in endoplasmic reticulum 3
tae00190 Oxidative phosphorylation 3
tae04142 Lysosome 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835015 103837291 103874615 106348803 111211560 107910563 107896406 121215495 102608374 100306269 100526986 100306572 100251751 7485845 7485884 11408789 11424567 101268716 102595034 102604244 107796353 107770842 4324140 100382435 100383916 123182989 123144559 123067141 123449578 8063558 8063068 100833793 100842551 66056188
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