ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-r.7	AT1G09160	Protein phosphatase 2C family protein
ath-u.5	AT1G09160	Protein phosphatase 2C family protein
ath-m.9	AT1G09160	Protein phosphatase 2C family protein
ath-e.2	AT1G09160	Protein phosphatase 2C family protein
ath-m.4.bio	AT1G09160	Protein phosphatase 2C family protein
ath-m.4.hor	AT1G09160	Protein phosphatase 2C family protein
ath-m.4.lig	AT1G09160	Protein phosphatase 2C family protein
ath-m.4.str	AT1G09160	Protein phosphatase 2C family protein
ath-m.4.tis	AT1G09160	Protein phosphatase 2C family protein
ath-u.5	AT1G47380	Protein phosphatase 2C family protein
ath-u.5	AT1G68410	Protein phosphatase 2C family protein
bra-r.6	103852478	probable protein phosphatase 2C 15
bra-r.6	103843902	probable protein phosphatase 2C 12
bra-r.6	103836355	probable protein phosphatase 2C 5
bna-r.1	106453791	probable protein phosphatase 2C 12
bna-r.1	106453168	probable protein phosphatase 2C 5
bna-r.1	106414624	probable protein phosphatase 2C 5
ghi-r.1	121220741	probable protein phosphatase 2C 15
ghi-r.1	107887163	probable protein phosphatase 2C 5
ghi-r.1	107894039	probable protein phosphatase 2C 5
cit-r.1	102610553	probable protein phosphatase 2C 5
cit-r.1	102616087	probable protein phosphatase 2C 12
cit-r.1	102628006	probable protein phosphatase 2C 3
gma-u.5	100778367	probable protein phosphatase 2C 12
gma-u.5	100810751	probable protein phosphatase 2C 12
gma-u.5	100779571	probable protein phosphatase 2C 15
vvi-u.5	100242244	probable protein phosphatase 2C 15
vvi-u.5	100249319	probable protein phosphatase 2C 5
vvi-u.5	100260807	probable protein phosphatase 2C 12
ppo-u.5	7482850	probable protein phosphatase 2C 15
ppo-u.5	7472692	probable protein phosphatase 2C 12
ppo-u.5	18104911	probable protein phosphatase 2C 12
mtr-u.5	11434713	probable protein phosphatase 2C 12
mtr-u.5	11411557	probable protein phosphatase 2C 12
mtr-u.5	11430539	probable protein phosphatase 2C 5
sly-u.5	101257069	probable protein phosphatase 2C 12
sly-u.5	101259166	probable protein phosphatase 2C 12
sly-u.5	101264465	probable protein phosphatase 2C 5
sot-r.1	102584584	probable protein phosphatase 2C 15
sot-r.1	102591986	probable protein phosphatase 2C 5
sot-r.1	102602627	probable protein phosphatase 2C 12
nta-r.1	107764370	putative protein phosphatase 2C 12
nta-r.1	107808341	putative protein phosphatase 2C 12
nta-r.1	107827467	putative protein phosphatase 2C 12
osa-u.5	4344366	probable protein phosphatase 2C 33
osa-u.5	4323983	probable protein phosphatase 2C 3
osa-u.5	4329716	probable protein phosphatase 2C 15
zma-u.5	100273605	uncharacterized LOC100273605
zma-u.5	100283184	uncharacterized LOC100283184
zma-u.5	100382524	uncharacterized LOC100382524
tae-r.2	123069827	probable protein phosphatase 2C 3
tae-r.2	123085639	probable protein phosphatase 2C 33
hvu-r.1	123448852	probable protein phosphatase 2C 33
hvu-r.1	123398729	probable protein phosphatase 2C 69
hvu-r.1	123402199	probable protein phosphatase 2C 15
sbi-r.1	8063707	probable protein phosphatase 2C 69
sbi-r.1	8069553	probable protein phosphatase 2C 3
sbi-r.1	8072607	probable protein phosphatase 2C 15
bdi-r.1	100840555	probable protein phosphatase 2C 33
bdi-r.1	100830132	probable protein phosphatase 2C 15
bdi-r.1	100822279	probable protein phosphatase 2C 69
cre-r.1	CHLRE_10g454450v5	uncharacterized protein

Top 50 coexpressed genes to AT1G09160 (ath-r.7 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G09160 (ath-r.7 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

Protein phosphatase 2C family protein

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM

GO MF

Protein

NP_172388.1 [sequence] [blastp]
NP_849621.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, extr 1	(predict for NP_172388.1)
chlo 8, extr 1	(predict for NP_849621.1)

Subcellular
localization
TargetP

mito 4, other 3	(predict for NP_172388.1)
mito 4, other 3	(predict for NP_849621.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-r.7 for AT1G09160	ath-u.5 for AT1G09160	ath-m.9 for AT1G09160	ath-e.2 for AT1G09160	ath-m.4.bio for AT1G09160	ath-m.4.hor for AT1G09160	ath-m.4.lig for AT1G09160	ath-m.4.str for AT1G09160	ath-m.4.tis for AT1G09160	ath-u.5 for AT1G47380	ath-u.5 for AT1G68410	bra-r.6 for 103852478	bra-r.6 for 103843902	bra-r.6 for 103836355	bna-r.1 for 106453791	bna-r.1 for 106453168	bna-r.1 for 106414624	ghi-r.1 for 121220741	ghi-r.1 for 107887163	ghi-r.1 for 107894039	cit-r.1 for 102610553	cit-r.1 for 102616087	cit-r.1 for 102628006	gma-u.5 for 100778367	gma-u.5 for 100810751	gma-u.5 for 100779571	vvi-u.5 for 100242244	vvi-u.5 for 100249319	vvi-u.5 for 100260807	ppo-u.5 for 7482850	ppo-u.5 for 7472692	ppo-u.5 for 18104911	mtr-u.5 for 11434713	mtr-u.5 for 11411557	mtr-u.5 for 11430539	sly-u.5 for 101257069	sly-u.5 for 101259166	sly-u.5 for 101264465	sot-r.1 for 102584584	sot-r.1 for 102591986	sot-r.1 for 102602627	nta-r.1 for 107764370	nta-r.1 for 107808341	nta-r.1 for 107827467	osa-u.5 for 4344366	osa-u.5 for 4323983	osa-u.5 for 4329716	zma-u.5 for 100273605	zma-u.5 for 100283184	zma-u.5 for 100382524	tae-r.2 for 123069827	tae-r.2 for 123085639	hvu-r.1 for 123448852	hvu-r.1 for 123398729	hvu-r.1 for 123402199	sbi-r.1 for 8063707	sbi-r.1 for 8069553	sbi-r.1 for 8072607	bdi-r.1 for 100840555	bdi-r.1 for 100830132	bdi-r.1 for 100822279	cre-r.1 for CHLRE_10g454450v5

Please wait a moment.

Ortholog

Ortholog ID: 470

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Protein phosphatase 2C family protein

probable protein phosphatase 2C 15

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 12

probable protein phosphatase 2C 15

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 15

probable protein phosphatase 2C 5

probable protein phosphatase 2C 12

probable protein phosphatase 2C 15

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 15

probable protein phosphatase 2C 12

probable protein phosphatase 2C 5

probable protein phosphatase 2C 15

probable protein phosphatase 2C 5

probable protein phosphatase 2C 12

putative protein phosphatase 2C 12

putative protein phosphatase 2C 5

probable protein phosphatase 2C 33

probable protein phosphatase 2C 40

uncharacterized LOC100272395

catalytic/ protein phosphatase type 2C

probable protein phosphatase 2C 12

probable protein phosphatase 2C 33

probable protein phosphatase 2C 69

probable protein phosphatase 2C 40

probable protein phosphatase 2C 12

probable protein phosphatase 2C 33

probable protein phosphatase 2C 40

probable protein phosphatase 2C 69

probable protein phosphatase 2C 33

probable protein phosphatase 2C 12

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	2
ath04148	Efferocytosis	2
ath04517	IgSF CAM signaling	2
ath04518	Integrin signaling	2
ath04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04070	Phosphatidylinositol signaling system	2
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi00541	Biosynthesis of various nucleotide sugars	3
vvi01250	Biosynthesis of nucleotide sugars	3
vvi00040	Pentose and glucuronate interconversions	2
vvi00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2
sly00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	4
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	3
bdi00010	Glycolysis / Gluconeogenesis	2

Expression

Expression pattern

Entrez Gene ID^*

837436

841141

843170

103852478

103843902

103868720

106453791

106414624

106371852

107894039

107905558

107887109

102610553

102616087

102629522

100779571

100796959

100794630

100242244

100249319

100260807

7472692

18104911

18102562

11411557

11416665

11438204

101257069

101259166

101264465

102584584

102591986

102602627

107808341

107827467

107806243

4344366

4332577

4335989

100272395

100283146

100284946

123097377

123172623

123448852

123398729

123426857

8080443

8084009

110436374

100822279

100843535

100844811

5723912

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	3	3	3	3	3	3	3	3	3	3	3	2	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G09160 (ath-r.7 coexpression data)

Top 50 enrichment test to AT1G09160 (ath-r.7 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**