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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-u.5   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.9   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-e.2   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.bio   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.hor   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.lig   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.str   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.tis   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 gma-u.5   100799441   DNA replication licensing factor MCM2 
 gma-u.5   100813006   DNA replication licensing factor MCM2 
 vvi-u.5   100266163   DNA replication licensing factor MCM2 
 ppo-u.5   18094485   DNA replication licensing factor MCM2 
 mtr-u.5   11413210   DNA replication licensing factor MCM2 
 sly-u.5   101260396   DNA replication licensing factor MCM2 
 osa-u.5   4350526   DNA replication licensing factor MCM2-like 
 zma-u.5   100501077   uncharacterized LOC100501077 

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Top 50 coexpressed genes to MCM2 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MCM2 (ath-r.7 coexpression data)

CoexMap"841056"


athMCM2 | Entrez gene ID : 841056      
Species ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IMP  
GO:0042127 [list] [network] regulation of cell population proliferation  (93 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0000347 [list] [network] THO complex  (14 genes)  IDA  
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001185154.1 [sequence] [blastp]
NP_175112.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_001185154.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_175112.2)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for NP_001185154.1)
chlo 8,  other 4  (predict for NP_175112.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
MCM2

.
ath-u.5
for
MCM2

.
ath-m.9
for
MCM2

.
ath-e.2
for
MCM2

.
ath-m.4.bio
for
MCM2

.
ath-m.4.hor
for
MCM2

.
ath-m.4.lig
for
MCM2

.
ath-m.4.str
for
MCM2

.
ath-m.4.tis
for
MCM2

.
gma-u.5
for
100799441

.
gma-u.5
for
100813006

.
vvi-u.5
for
100266163

.
ppo-u.5
for
18094485

.
mtr-u.5
for
11413210

.
sly-u.5
for
101260396

.
osa-u.5
for
4350526

.
zma-u.5
for
100501077

.


Ortholog ID: 8733
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MCM2 LOC100813006 LOC100799441 LOC101260396 LOC4350526 LOC100501077 LOC103849416 LOC100266163 LOC18094485 LOC11413210 LOC100037644 LOC543455 LOC123442642 LOC107910656 LOC107888453 LOC106371887 LOC106380468 CHLRE_07g338000v5 LOC8155437 LOC102589508 LOC102630547 LOC100824624 LOC107805831 LOC107808167
Function* minichromosome maintenance (MCM2/3/5) family protein DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2-like uncharacterized LOC100501077 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2-like DNA replication licensing factor MCM2 uncharacterized protein DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 12
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 11
osa03420 Nucleotide excision repair 4
osa03430 Mismatch repair 3
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 12
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 15
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841056 100813006 100799441 101260396 4350526 100501077 103849416 100266163 18094485 11413210 100037644 543455 123442642 107910656 107888453 106371887 106380468 5725643 8155437 102589508 102630547 100824624 107805831 107808167
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