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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   GA2ox2   gibberellin 2-oxidase 2 
 sly-r.6   GA2ox2   gibberellin 2-oxidase 2 
 sly-u.5   GA2ox5   gibberellin 2-oxidase 
 sly-u.5   101249786   gibberellin 2-beta-dioxygenase 1 
 sot-r.1   102605134   gibberellin 2-beta-dioxygenase 1-like 
 sot-r.1   102600357   gibberellin 2-beta-dioxygenase 1-like 
 nta-r.1   107829774   gibberellin 2-beta-dioxygenase 1-like 
 ath-u.5   GA2OX2   gibberellin 2-oxidase 
 gma-u.5   GA2OX8   gibberellin 2-beta-dioxygenase 8 
 bra-r.6   103828910   gibberellin 2-beta-dioxygenase 2 
 vvi-u.5   100264177   gibberellin 2-beta-dioxygenase 1 
 vvi-u.5   100244543   gibberellin 2-beta-dioxygenase 
 vvi-u.5   100248356   gibberellin 2-beta-dioxygenase 1 
 ppo-u.5   7490835   gibberellin 2-beta-dioxygenase 
 ppo-u.5   7459116   gibberellin 2-beta-dioxygenase 1 
 mtr-u.5   25502480   gibberellin 2-beta-dioxygenase 1 
 mtr-u.5   11443852   gibberellin 2-beta-dioxygenase 
 mtr-u.5   25487088   gibberellin 2-beta-dioxygenase 1 
 ghi-r.1   107899629   gibberellin 2-beta-dioxygenase 1 
 ghi-r.1   107885967   gibberellin 2-beta-dioxygenase 
 bna-r.1   106364683   gibberellin 2-beta-dioxygenase 2-like 
 bna-r.1   106357909   gibberellin 2-beta-dioxygenase 2 
 cit-r.1   102614198   gibberellin 2-beta-dioxygenase 
 cit-r.1   102628050   gibberellin 2-beta-dioxygenase 1 
 osa-u.5   4339310   gibberellin 2-beta-dioxygenase 3-like 
 osa-u.5   4325145   gibberellin 2-beta-dioxygenase 3-like 
 zma-u.5   103636636   gibberellin 2-beta-dioxygenase 3 
 zma-u.5   103651195   gibberellin 2-beta-dioxygenase 
 zma-u.5   100281876   gibberellin 2-beta-dioxygenase 
 tae-r.2   123070818   gibberellin 2-beta-dioxygenase 3 
 tae-r.2   101290635   gibberellin 2-beta-dioxygenase 3 
 hvu-r.1   123416361   gibberellin 2-beta-dioxygenase 3-like 
 hvu-r.1   123444441   gibberellin 2-beta-dioxygenase 3 
 sbi-r.1   8072094   gibberellin 2-beta-dioxygenase 
 bdi-r.1   100845998   gibberellin 2-beta-dioxygenase 
 bdi-r.1   100831936   gibberellin 2-beta-dioxygenase 

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Top 50 coexpressed genes to GA2ox2 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GA2ox2 (sly-u.5 coexpression data)

CoexMap"100037505"


slyGA2ox2 | Entrez gene ID : 100037505      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 1 1 3 2 3 2 2 2 2 3 2 2 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00904 [list] [network] Diterpenoid biosynthesis (30 genes)
GO BP
GO:0045487 [list] [network] gibberellin catabolic process  (11 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (118 genes)  IEA  
GO CC
GO MF
Protein NP_001234338.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  vacu 1,  cyto 1,  mito 1,  E.R._vacu 1  (predict for NP_001234338.1)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for NP_001234338.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
GA2ox2
sly-r.6
for
GA2ox2
sly-u.5
for
GA2ox5
sly-u.5
for
101249786
sot-r.1
for
102605134
sot-r.1
for
102600357
nta-r.1
for
107829774
ath-u.5
for
GA2OX2
gma-u.5
for
GA2OX8
bra-r.6
for
103828910
vvi-u.5
for
100264177
vvi-u.5
for
100244543
vvi-u.5
for
100248356
ppo-u.5
for
7490835
ppo-u.5
for
7459116
mtr-u.5
for
25502480
mtr-u.5
for
11443852
mtr-u.5
for
25487088
ghi-r.1
for
107899629
ghi-r.1
for
107885967
bna-r.1
for
106364683
bna-r.1
for
106357909
cit-r.1
for
102614198
cit-r.1
for
102628050
osa-u.5
for
4339310
osa-u.5
for
4325145
zma-u.5
for
103636636
zma-u.5
for
103651195
zma-u.5
for
100281876
tae-r.2
for
123070818
tae-r.2
for
101290635
hvu-r.1
for
123416361
hvu-r.1
for
123444441
sbi-r.1
for
8072094
bdi-r.1
for
100845998
bdi-r.1
for
100831936


Ortholog ID: 1095
Species sly sly sot sot nta nta ath gma gma bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae hvu hvu sbi bdi bdi
Symbol GA2ox2 GA2ox4 LOC102605134 LOC102599704 LOC107829774 LOC107792942 GA2OX2 GA2OX8 GA2OX6 LOC103853128 LOC100264177 LOC100244543 LOC100248356 LOC7490835 LOC7459116 LOC25502480 LOC11443852 LOC11405283 LOC121230864 LOC121203218 LOC107918373 LOC106364683 LOC106435076 LOC106375947 LOC102614198 LOC102628050 LOC4339310 LOC4325145 LOC103636636 LOC103651195 LOC100281876 LOC123070818 LOC123062094 LOC123416361 LOC123444441 LOC8072094 LOC100845998 LOC100831936
Function* gibberellin 2-oxidase 2 gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 1-like gibberellin 2-beta-dioxygenase 1-like gibberellin 2-beta-dioxygenase 1-like gibberellin 2-beta-dioxygenase 1-like gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 8 gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 1 gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase 3-like gibberellin 2-beta-dioxygenase 3 gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase gibberellin 2-beta-dioxygenase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 10
sly04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00480 Glutathione metabolism 3
sly00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00480 Glutathione metabolism 2
nta00904 Diterpenoid biosynthesis 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 3
bra00450 Selenocompound metabolism 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00052 Galactose metabolism 3
vvi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
ghi00904 Diterpenoid biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 3
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 5
ghi00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 5
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cit00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00904 Diterpenoid biosynthesis 3
zma04016 MAPK signaling pathway - plant 2
zma04626 Plant-pathogen interaction 2
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00350 Tyrosine metabolism 4
tae00360 Phenylalanine metabolism 4
tae01240 Biosynthesis of cofactors 3
tae00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00350 Tyrosine metabolism 4
tae00360 Phenylalanine metabolism 4
tae00310 Lysine degradation 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 4
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100037505 100134889 102605134 102599704 107829774 107792942 839883 100806026 100818088 103853128 100264177 100244543 100248356 7490835 7459116 25502480 11443852 11405283 121230864 121203218 107918373 106364683 106435076 106375947 102614198 102628050 4339310 4325145 103636636 103651195 100281876 123070818 123062094 123416361 123444441 8072094 100845998 100831936
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