ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100037798	brittle stalk-2-like protein 4
zma-r.6	100037798	brittle stalk-2-like protein 4
zma-u.5	541793	brittle stalk-2-like protein 3
zma-u.5	100037800	brittle stalk-2-like protein 7
zma-u.5	100037799	brittle stalk-2-like protein 6
osa-u.5	4343845	COBRA-like protein 6
osa-u.5	4343844	COBRA-like protein 1
osa-u.5	4338658	COBRA-like protein 3
ath-u.5	IRX6	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
ath-u.5	COBL1	COBRA-like protein 1 precursor
ath-u.5	COBL2	COBRA-like protein 2 precursor
gma-u.5	100804568	protein COBRA
gma-u.5	100811581	protein COBRA
sly-u.5	101260090	COBRA-like protein 6
sly-u.5	101259823	COBRA-like protein 1
sly-u.5	101253146	COBRA-like protein 4
vvi-u.5	100263436	protein COBRA
vvi-u.5	100263971	protein COBRA
mtr-u.5	25495418	COBRA-like protein 1
mtr-u.5	25495419	protein COBRA

Annotation

functional annotation

KEGG

GO BP

GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process	(7 genes)	IEA
GO:0010215 [list] [network] cellulose microfibril organization	(10 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(793 genes)

IEA

GO MF

Protein

NP_001105969.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, golg 3, golg_plas 3, plas 1, E.R._vacu 1

(predict for NP_001105969.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001105969.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100037798	zma-r.6 for 100037798	zma-u.5 for 541793	zma-u.5 for 100037800	zma-u.5 for 100037799	osa-u.5 for 4343845	osa-u.5 for 4343844	osa-u.5 for 4338658	ath-u.5 for IRX6	ath-u.5 for COBL1	ath-u.5 for COBL2	gma-u.5 for 100804568	gma-u.5 for 100811581	sly-u.5 for 101260090	sly-u.5 for 101259823	sly-u.5 for 101253146	vvi-u.5 for 100263436	vvi-u.5 for 100263971	mtr-u.5 for 25495418	mtr-u.5 for 25495419

Ortholog

Ortholog ID: 307

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

COB

COBL6

Function^*

brittle stalk-2-like protein 3

brittle stalk-2-like protein 4

COBRA-like protein 5

COBRA-like protein 1

COBRA-like protein 6

COBRA-like protein 3

COBRA-like protein 1

COBRA-like protein 2

COBRA-like protein 3

COBRA-like protein 1

COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

COBRA-like protein 6 precursor

protein COBRA-like

COBRA-like protein 4-like

protein COBRA-like

COBRA-like protein 6

COBRA-like protein 4

protein COBRA

COBRA-like protein 2

COBRA-like protein 4

COBRA-like protein 1

COBRA-like protein 6

COBRA-like protein 2

COBRA-like protein 4

protein COBRA-like

COBRA-like protein 4

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00999	Biosynthesis of various plant secondary metabolites	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

541793

100037798

8070042

4343844

4343845

123105056

123188006

123447814

123403280

100823628

836213

837508

100782876

100783410

101251844

112940047

103856152

100263436

100263971

7480590

7480591

25495418

107951886

106346245

106399754

102598920

102604326

102609762

107807501

107807502

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100037798 (zma-u.5 coexpression data)

Top 50 enrichment test to 100037798 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	mtr	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	2	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100037798 (zma-u.5 coexpression data)

Top 50 enrichment test to 100037798 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**