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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100037827   chloroplast post-illumination chlorophyll fluorescence increase protein 
 zma-r.6   100037827   chloroplast post-illumination chlorophyll fluorescence increase protein 
 zma-m.5   100037827   chloroplast post-illumination chlorophyll fluorescence increase protein 
 zma-u.5   100272863   uncharacterized LOC100272863 
 sbi-r.1   8064544   uncharacterized LOC8064544 
 osa-u.5   4333342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 tae-r.2   123148288   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 tae-r.2   123159478   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 tae-r.2   123166369   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 hvu-r.1   123412505   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 bdi-r.1   100845363   uncharacterized LOC100845363 
 ath-u.5   PIFI   post-illumination chlorophyll fluorescence increase 
 gma-u.5   100818459   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 gma-u.5   100790141   uncharacterized LOC100790141 
 sly-u.5   101260209   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 bra-r.6   103869869   uncharacterized LOC103869869 
 bra-r.6   103859641   uncharacterized LOC103859641 
 vvi-u.5   PIFI   chloroplast post-illumination chlorophyll fluorescence increase protein 
 ppo-u.5   7470544   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 mtr-u.5   11429342   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 ghi-r.1   121230813   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 ghi-r.1   107937380   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 bna-r.1   106439423   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic-like 
 bna-r.1   BNAC03G39300D   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 bna-r.1   125609035   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 sot-r.1   102579625   uncharacterized LOC102579625 
 cit-r.1   102621225   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 
 nta-r.1   107830728   uncharacterized LOC107830728 
 nta-r.1   107791394   protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic 

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Top 50 coexpressed genes to 100037827 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100037827 (zma-u.5 coexpression data)

CoexMap"100037827"


zmaLOC100037827 | Entrez gene ID : 100037827      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010478 [list] [network] chlororespiration  (2 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (118 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (237 genes)  IEA  
GO MF
Protein NP_001361226.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001361226.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for NP_001361226.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100037827
zma-r.6
for
100037827
zma-m.5
for
100037827
zma-u.5
for
100272863
sbi-r.1
for
8064544
osa-u.5
for
4333342
tae-r.2
for
123148288
tae-r.2
for
123159478
tae-r.2
for
123166369
hvu-r.1
for
123412505
bdi-r.1
for
100845363
ath-u.5
for
PIFI
gma-u.5
for
100818459
gma-u.5
for
100790141
sly-u.5
for
101260209
bra-r.6
for
103869869
bra-r.6
for
103859641
vvi-u.5
for
PIFI
ppo-u.5
for
7470544
mtr-u.5
for
11429342
ghi-r.1
for
121230813
ghi-r.1
for
107937380
bna-r.1
for
106439423
bna-r.1
for
BNAC03G39300D
bna-r.1
for
125609035
sot-r.1
for
102579625
cit-r.1
for
102621225
nta-r.1
for
107830728
nta-r.1
for
107791394


Ortholog ID: 8006
Species zma zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100037827 LOC100272863 LOC8064544 LOC4333342 LOC123148288 LOC123159478 LOC123166369 LOC123412505 LOC100845363 PIFI LOC100818459 LOC100790141 LOC101260209 LOC103869869 LOC103859641 PIFI LOC7470544 LOC11429342 LOC121230813 LOC107937380 BNAC03G39300D LOC125609035 LOC106402347 LOC102579625 LOC102621225 LOC107830728 LOC107791394
Function* chloroplast post-illumination chlorophyll fluorescence increase protein uncharacterized LOC100272863 uncharacterized LOC8064544 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC100845363 post-illumination chlorophyll fluorescence increase protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC100790141 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC103869869 uncharacterized LOC103859641 chloroplast post-illumination chlorophyll fluorescence increase protein protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC102579625 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic uncharacterized LOC107830728 protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00730 Thiamine metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot01200 Carbon metabolism 5
sot00710 Carbon fixation by Calvin cycle 3
sot00260 Glycine, serine and threonine metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100037827 100272863 8064544 4333342 123148288 123159478 123166369 123412505 100845363 820827 100818459 100790141 101260209 103869869 103859641 100264489 7470544 11429342 121230813 107937380 106406162 125609035 106402347 102579625 102621225 107830728 107791394
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