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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100101546   uncharacterized LOC100101546 
 zma-r.6   100101546   uncharacterized LOC100101546 
 zma-u.5   100282896   SSXT protein 
 zma-u.5   100101544   growth-regulating-factor-inteacting factor1 
 zma-u.5   100101545   GRF-interacting factor 2-like 
 osa-u.5   4334010   GRF1-interacting factor 1 
 osa-u.5   4350919   GRF1-interacting factor 2 
 osa-u.5   4352256   GRF1-interacting factor 3 
 ath-u.5   GIF3   GRF1-interacting factor 3 
 ath-u.5   AN3   SSXT family protein 
 ath-u.5   GIF2   GRF1-interacting factor 2 
 gma-u.5   100812917   GRF1-interacting factor 1-like 
 gma-u.5   100804074   GRF1-interacting factor 3 
 sly-u.5   101253549   GRF1-interacting factor 1 
 sly-u.5   101251372   GRF1-interacting factor 1-like 
 sly-u.5   101246804   GRF1-interacting factor 2-like 
 vvi-u.5   100262678   GRF1-interacting factor 3 
 vvi-u.5   100257141   GRF1-interacting factor 2 
 vvi-u.5   100244659   GRF1-interacting factor 1 
 ppo-u.5   7487734   GRF1-interacting factor 3 
 ppo-u.5   7487688   GRF1-interacting factor 1 
 ppo-u.5   7486798   GRF1-interacting factor 3 
 mtr-u.5   25499695   GRF1-interacting factor 1 
 mtr-u.5   11409518   GRF1-interacting factor 1 

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Top 50 coexpressed genes to 100101546 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100101546 (zma-u.5 coexpression data)

CoexMap"100101546"


zmaLOC100101546 | Entrez gene ID : 100101546      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 2 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001106032.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  mito 2,  chlo_mito 2  (predict for NP_001106032.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001106032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100101546
zma-r.6
for
100101546
zma-u.5
for
100282896
zma-u.5
for
100101544
zma-u.5
for
100101545
osa-u.5
for
4334010
osa-u.5
for
4350919
osa-u.5
for
4352256
ath-u.5
for
GIF3
ath-u.5
for
AN3
ath-u.5
for
GIF2
gma-u.5
for
100812917
gma-u.5
for
100804074
sly-u.5
for
101253549
sly-u.5
for
101251372
sly-u.5
for
101246804
vvi-u.5
for
100262678
vvi-u.5
for
100257141
vvi-u.5
for
100244659
ppo-u.5
for
7487734
ppo-u.5
for
7487688
ppo-u.5
for
7486798
mtr-u.5
for
25499695
mtr-u.5
for
11409518


Ortholog ID: 997
Species zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta cre
Symbol LOC100282896 LOC100101544 LOC8059943 LOC8064085 LOC4352256 LOC4334010 LOC123119911 LOC123102766 LOC123448413 LOC123447684 LOC100843824 LOC100835669 GIF3 GIF2 LOC100794665 LOC101251372 LOC101246804 LOC103844629 LOC103874584 LOC100262678 LOC100257141 LOC7486798 LOC7464311 LOC25499695 LOC11409518 LOC107950356 LOC107895071 LOC111211538 LOC106367766 LOC102597163 LOC102593346 LOC102625389 LOC102616744 LOC107813143 LOC107796505 CHLRE_01g055200v5
Function* SSXT protein growth-regulating-factor-inteacting factor1 GRF1-interacting factor 1 GRF1-interacting factor 2 GRF1-interacting factor 3 GRF1-interacting factor 1 GRF1-interacting factor 2 GRF1-interacting factor 3 GRF1-interacting factor 2-like GRF-interacting factor 1 GRF1-interacting factor 1 GRF1-interacting factor 2 GRF1-interacting factor 3 GRF1-interacting factor 2 GRF1-interacting factor 3 GRF1-interacting factor 1-like GRF1-interacting factor 2-like GRF1-interacting factor 2 GRF1-interacting factor 1 GRF1-interacting factor 3 GRF1-interacting factor 2 GRF1-interacting factor 3 GRF1-interacting factor 3 GRF1-interacting factor 1 GRF1-interacting factor 1 GRF1-interacting factor 2 GRF1-interacting factor 1 GRF1-interacting factor 1-like GRF1-interacting factor 1-like GRF1-interacting factor 3-like GRF1-interacting factor 1-like GRF1-interacting factor 1 GRF1-interacting factor 3 GRF1-interacting factor 1-like GRF1-interacting factor 1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma03030 DNA replication 2
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03420 Nucleotide excision repair 5
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03060 Protein export 3
bdi03040 Spliceosome 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 5
ppo01212 Fatty acid metabolism 5
ppo00780 Biotin metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00230 Purine metabolism 6
ghi00730 Thiamine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100282896 100101544 8059943 8064085 4352256 4334010 123119911 123102766 123448413 123447684 100843824 100835669 827995 839278 100794665 101251372 101246804 103844629 103874584 100262678 100257141 7486798 7464311 25499695 11409518 107950356 107895071 111211538 106367766 102597163 102593346 102625389 102616744 107813143 107796505 5725728
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