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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100125655   uncharacterized LOC100125655 
 zma-r.6   100125655   uncharacterized LOC100125655 
 zma-m.5   100125655   uncharacterized LOC100125655 
 osa-u.5   4340044   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 ath-u.5   CLP2   CLP protease proteolytic subunit 2 
 gma-u.5   100800113   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 gma-u.5   100793679   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 sly-u.5   101261350   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 vvi-u.5   100256891   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 ppo-u.5   18094418   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 
 mtr-u.5   11407134   ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 

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Top 50 coexpressed genes to 100125655 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100125655 (zma-u.5 coexpression data)

CoexMap"100125655"


zmaLOC100125655 | Entrez gene ID : 100125655      
Species zma osa ath gma sly vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (13 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (36 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (139 genes)  IEA  
Protein NP_001106056.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_001106056.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001106056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100125655

.
zma-r.6
for
100125655

.
zma-m.5
for
100125655

.
osa-u.5
for
4340044

.
ath-u.5
for
CLP2

.
gma-u.5
for
100800113

.
gma-u.5
for
100793679

.
sly-u.5
for
101261350

.
vvi-u.5
for
100256891

.
ppo-u.5
for
18094418

.
mtr-u.5
for
11407134

.


Ortholog ID: 7795
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CLP2 LOC100793679 LOC100800113 LOC101261350 LOC4340044 LOC100125655 LOC103872006 LOC103843128 LOC100256891 LOC18094418 LOC11407134 LOC123150475 LOC123167378 LOC123408852 LOC107941637 LOC107936380 LOC106445582 LOC111206485 CHLRE_16g682900v5 LOC110431214 LOC102604367 LOC102612769 LOC100834344 LOC107774235 LOC107782632
Function* CLP protease proteolytic subunit 2 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic uncharacterized LOC100125655 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic uncharacterized protein ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma00860 Porphyrin metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 3
cre01230 Biosynthesis of amino acids 3
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837797 100793679 100800113 101261350 4340044 100125655 103872006 103843128 100256891 18094418 11407134 123150475 123167378 123408852 107941637 107936380 106445582 111206485 5717588 110431214 102604367 102612769 100834344 107774235 107782632
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