ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100127013	NADH dehydrogenase 2
zma-r.6	100127013	NADH dehydrogenase 2
zma-u.5	100192583	NADH-ubiquinone oxidoreductase subunit
sbi-r.1	8069805	NADH-quinone oxidoreductase subunit B
osa-u.5	107276869	uncharacterized LOC107276869
osa-u.5	4339427	uncharacterized LOC4339427
tae-r.2	123070766	NADH-quinone oxidoreductase subunit B 1
tae-r.2	123062042	NADH-quinone oxidoreductase subunit B 1
tae-r.2	123174036	NADH-quinone oxidoreductase subunit B
hvu-r.1	123444298	NADH-quinone oxidoreductase subunit B 1-like
bdi-r.1	100827781	NADH-quinone oxidoreductase subunit B 1
ath-u.5	AT5G11770	NADH-ubiquinone oxidoreductase 20 kDa subunit
gma-u.5	100817153	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
gma-u.5	100814025	NADH-quinone oxidoreductase subunit B 1
gma-u.5	100802267	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
sly-u.5	101248942	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
bra-r.6	103855929	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
bra-r.6	103850793	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
bra-r.6	103846695	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
vvi-u.5	100262767	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
ppo-u.5	18100652	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
mtr-u.5	11431403	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
ghi-r.1	107895342	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
ghi-r.1	107961658	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
ghi-r.1	107953877	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
bna-r.1	106424602	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
bna-r.1	106383648	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like
bna-r.1	106429819	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
sot-r.1	102579157	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like
cit-r.1	102618563	uncharacterized LOC102618563
nta-r.1	107762627	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
nta-r.1	107791695	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
cre-r.1	CHLRE_12g492300v5	uncharacterized protein

Top 50 coexpressed genes to 100127013 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100127013 (zma-u.5 coexpression data)

CoexMap"100127013"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00190 [list] [network] Oxidative phosphorylation (267 genes)

GO BP

GO:0032981 [list] [network] mitochondrial respiratory chain complex I assembly	(15 genes)	IEA
GO:0015990 [list] [network] electron transport coupled proton transport	(17 genes)	IEA
GO:0009060 [list] [network] aerobic respiration	(269 genes)	IEA

GO CC

GO:0045271 [list] [network] respiratory chain complex I

(69 genes)

IEA

GO MF

GO:0048038 [list] [network] quinone binding	(21 genes)	IEA
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding	(31 genes)	IEA
GO:0008137 [list] [network] NADH dehydrogenase (ubiquinone) activity	(34 genes)	IEA

Protein

NP_001296778.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 2

(predict for NP_001296778.1)

Subcellular
localization
TargetP

mito 8

(predict for NP_001296778.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100127013	zma-r.6 for 100127013	zma-u.5 for 100192583	sbi-r.1 for 8069805	osa-u.5 for 107276869	osa-u.5 for 4339427	tae-r.2 for 123070766	tae-r.2 for 123062042	tae-r.2 for 123174036	hvu-r.1 for 123444298	bdi-r.1 for 100827781	ath-u.5 for AT5G11770	gma-u.5 for 100817153	gma-u.5 for 100814025	gma-u.5 for 100802267	sly-u.5 for 101248942	bra-r.6 for 103855929	bra-r.6 for 103850793	bra-r.6 for 103846695	vvi-u.5 for 100262767	ppo-u.5 for 18100652	mtr-u.5 for 11431403	ghi-r.1 for 107895342	ghi-r.1 for 107961658	ghi-r.1 for 107953877	bna-r.1 for 106424602	bna-r.1 for 106383648	bna-r.1 for 106429819	sot-r.1 for 102579157	cit-r.1 for 102618563	nta-r.1 for 107762627	nta-r.1 for 107791695	cre-r.1 for CHLRE_12g492300v5

Ortholog

Ortholog ID: 4972

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

NADH dehydrogenase 2

NADH-ubiquinone oxidoreductase subunit

NADH-quinone oxidoreductase subunit B

uncharacterized LOC107276869

uncharacterized LOC4339427

NADH-quinone oxidoreductase subunit B 1

NADH-quinone oxidoreductase subunit B 1-like

NADH-quinone oxidoreductase subunit B 1

NADH-ubiquinone oxidoreductase 20 kDa subunit

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

NADH-quinone oxidoreductase subunit B 1

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like

uncharacterized LOC102618563

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	11
zma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	10
zma01200	Carbon metabolism	3
zma00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	13
sbi04145	Phagosome	5
sbi04142	Lysosome	4
sbi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	10
tae04145	Phagosome	4
tae00020	Citrate cycle (TCA cycle)	3
tae01200	Carbon metabolism	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	11
tae04145	Phagosome	5
tae04142	Lysosome	3
tae00020	Citrate cycle (TCA cycle)	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	7
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi00020	Citrate cycle (TCA cycle)	2
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	8
ath01230	Biosynthesis of amino acids	2
ath04148	Efferocytosis	2
ath03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	9
gma00020	Citrate cycle (TCA cycle)	3
gma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	9
gma00020	Citrate cycle (TCA cycle)	4
gma01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	9
sly04145	Phagosome	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4
vvi04141	Protein processing in endoplasmic reticulum	2
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00020	Citrate cycle (TCA cycle)	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	10
mtr00020	Citrate cycle (TCA cycle)	3
mtr01200	Carbon metabolism	3
mtr04142	Lysosome	2
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi01240	Biosynthesis of cofactors	4
ghi04146	Peroxisome	2
ghi00740	Riboflavin metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi01240	Biosynthesis of cofactors	4
ghi04146	Peroxisome	2
ghi00740	Riboflavin metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi01240	Biosynthesis of cofactors	4
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6
bna00052	Galactose metabolism	4
bna00500	Starch and sucrose metabolism	4
bna00520	Amino sugar and nucleotide sugar metabolism	4
bna01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna04626	Plant-pathogen interaction	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot04145	Phagosome	4
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	8
cit03040	Spliceosome	2
cit04144	Endocytosis	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	6
nta00290	Valine, leucine and isoleucine biosynthesis	3
nta00660	C5-Branched dibasic acid metabolism	3
nta01210	2-Oxocarboxylic acid metabolism	3
nta01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	11
nta00010	Glycolysis / Gluconeogenesis	2
nta00071	Fatty acid degradation	2
nta00350	Tyrosine metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	4

Expression

Expression pattern

Entrez Gene ID^*

100127013

100192583

8069805

107276869

4339427

123070766

123062042

123096896

123444298

100827781

831049

100817153

100814025

100802267

101248942

103855929

103850793

103846695

100262767

18100652

11431403

107895342

107961658

107929950

106424602

106383648

106429819

102579157

102618563

107791695

107801402

5726136

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	2	3	1	1	1	3	1	3	1	1	1	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100127013 (zma-u.5 coexpression data)

Top 50 enrichment test to 100127013 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**