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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100191228   Endonuclease/Exonuclease/phosphatase family 
 zma-r.6   100191228   Endonuclease/Exonuclease/phosphatase family 
 zma-m.5   100191228   Endonuclease/Exonuclease/phosphatase family 
 zma-u.5   100502258   uncharacterized LOC100502258 
 osa-u.5   4352068   uncharacterized LOC4352068 
 ath-u.5   AT1G11800   endonuclease/exonuclease/phosphatase family protein 
 gma-u.5   100776999   uncharacterized LOC100776999 
 gma-u.5   100776602   tyrosyl-DNA phosphodiesterase 2-like 
 sly-u.5   101257617   uncharacterized LOC101257617 
 vvi-u.5   100255468   uncharacterized LOC100255468 
 ppo-u.5   18097370   uncharacterized LOC18097370 
 mtr-u.5   11442699   uncharacterized LOC11442699 

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Top 50 coexpressed genes to 100191228 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100191228 (zma-u.5 coexpression data)

CoexMap"100191228"


zmaLOC100191228 | Entrez gene ID : 100191228      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006302 [list] [network] double-strand break repair  (119 genes)  IEA  
GO CC
GO:0016605 [list] [network] PML body  (2 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0070260 [list] [network] 5'-tyrosyl-DNA phosphodiesterase activity  (2 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (80 genes)  IEA  
Protein NP_001130134.1 [sequence] [blastp]
XP_008646247.1 [sequence] [blastp]
XP_035817634.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_001130134.1)
chlo 5,  nucl 2,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_008646247.1)
nucl 4,  cyto 3,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_035817634.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001130134.1)
chlo 6  (predict for XP_008646247.1)
other 8,  chlo 3  (predict for XP_035817634.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100191228
zma-r.6
for
100191228
zma-m.5
for
100191228
zma-u.5
for
100502258
osa-u.5
for
4352068
ath-u.5
for
AT1G11800
gma-u.5
for
100776999
gma-u.5
for
100776602
sly-u.5
for
101257617
vvi-u.5
for
100255468
ppo-u.5
for
18097370
mtr-u.5
for
11442699


Ortholog ID: 6696
Species zma zma sbi osa tae tae hvu bdi bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre cre
Symbol LOC100502258 LOC100191228 LOC8065672 LOC4352068 LOC123132416 LOC123143970 LOC123403200 LOC100827144 LOC100841299 AT1G11800 LOC100776999 LOC100776602 LOC101257617 LOC103843222 LOC100255468 LOC18097370 LOC11442699 LOC121230915 LOC107960178 LOC106415241 LOC106435819 LOC102578785 LOC102625567 LOC107826971 LOC107814620 CHLRE_06g305250v5 CHLRE_06g305050v5
Function* uncharacterized LOC100502258 Endonuclease/Exonuclease/phosphatase family uncharacterized LOC8065672 uncharacterized LOC4352068 uncharacterized LOC123132416 uncharacterized LOC123143970 uncharacterized LOC123403200 tyrosyl-DNA phosphodiesterase 2 uncharacterized LOC100841299 endonuclease/exonuclease/phosphatase family protein uncharacterized LOC100776999 tyrosyl-DNA phosphodiesterase 2-like uncharacterized LOC101257617 tyrosyl-DNA phosphodiesterase 2 uncharacterized LOC100255468 uncharacterized LOC18097370 uncharacterized LOC11442699 uncharacterized LOC121230915 uncharacterized LOC107960178 tyrosyl-DNA phosphodiesterase 2 tyrosyl-DNA phosphodiesterase 2-like uncharacterized LOC102578785 uncharacterized LOC102625567 uncharacterized LOC107826971 uncharacterized LOC107814620 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu01230 Biosynthesis of amino acids 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 9
bra03060 Protein export 5
bra04145 Phagosome 4
bra04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta00670 One carbon pool by folate 4
nta00999 Biosynthesis of various plant secondary metabolites 4
nta01230 Biosynthesis of amino acids 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100502258 100191228 8065672 4352068 123132416 123143970 123403200 100827144 100841299 837726 100776999 100776602 101257617 103843222 100255468 18097370 11442699 121230915 107960178 106415241 106435819 102578785 102625567 107826971 107814620 66053894 5716902
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