ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100192491	uncharacterized LOC100192491
zma-r.6	100192491	uncharacterized LOC100192491
zma-u.5	103630114	uncharacterized LOC103630114
sbi-r.1	8084363	uncharacterized LOC8084363
sbi-r.1	8065883	uncharacterized LOC8065883
osa-u.5	4325666	uncharacterized LOC4325666
osa-u.5	4338002	uncharacterized LOC4338002
tae-r.2	123115257	uncharacterized LOC123115257
tae-r.2	123060395	uncharacterized LOC123060395
tae-r.2	123041010	uncharacterized LOC123041010
hvu-r.1	123427196	uncharacterized LOC123427196
hvu-r.1	123442918	uncharacterized LOC123442918
bdi-r.1	100832747	uncharacterized LOC100832747
bdi-r.1	100822738	uncharacterized LOC100822738
ath-u.5	AT4G32920	glycine-rich protein
ath-u.5	AT5G11700	ephrin type-B receptor
gma-u.5	100804207	uncharacterized LOC100804207
gma-u.5	100796396	uncharacterized LOC100796396
sly-u.5	101243915	uncharacterized LOC101243915
sly-u.5	101261029	uncharacterized LOC101261029
bra-r.6	103855923	uncharacterized LOC103855923
bra-r.6	103862203	uncharacterized LOC103862203
bra-r.6	103846697	uncharacterized LOC103846697
vvi-u.5	100243932	uncharacterized LOC100243932
vvi-u.5	100252538	uncharacterized LOC100252538
ppo-u.5	7476632	uncharacterized LOC7476632
ppo-u.5	7470726	uncharacterized LOC7470726
mtr-u.5	11409611	uncharacterized LOC11409611
mtr-u.5	11432741	uncharacterized LOC11432741
ghi-r.1	107962697	uncharacterized LOC107962697
ghi-r.1	107959485	uncharacterized LOC107959485
ghi-r.1	107937972	uncharacterized LOC107937972
bna-r.1	106430903	uncharacterized LOC106430903
bna-r.1	BNAC09G44880D	uncharacterized BNAC09G44880D
bna-r.1	106358525	uncharacterized LOC106358525
sot-r.1	102604884	uncharacterized LOC102604884
sot-r.1	102598748	uncharacterized LOC102598748
cit-r.1	102616975	uncharacterized LOC102616975
cit-r.1	102608613	hypothetical protein
nta-r.1	107829307	uncharacterized LOC107829307
nta-r.1	107830930	uncharacterized LOC107830930
nta-r.1	107832735	uncharacterized LOC107832735

Top 50 coexpressed genes to 100192491 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100192491 (zma-u.5 coexpression data)

CoexMap"100192491"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001337061.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 8, mito 1, vacu 1, E.R. 1, E.R._vacu 1

(predict for NP_001337061.1)

Subcellular
localization
TargetP

scret 8

(predict for NP_001337061.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100192491	zma-r.6 for 100192491	zma-u.5 for 103630114	sbi-r.1 for 8084363	sbi-r.1 for 8065883	osa-u.5 for 4325666	osa-u.5 for 4338002	tae-r.2 for 123115257	tae-r.2 for 123060395	tae-r.2 for 123041010	hvu-r.1 for 123427196	hvu-r.1 for 123442918	bdi-r.1 for 100832747	bdi-r.1 for 100822738	ath-u.5 for AT4G32920	ath-u.5 for AT5G11700	gma-u.5 for 100804207	gma-u.5 for 100796396	sly-u.5 for 101243915	sly-u.5 for 101261029	bra-r.6 for 103855923	bra-r.6 for 103862203	bra-r.6 for 103846697	vvi-u.5 for 100243932	vvi-u.5 for 100252538	ppo-u.5 for 7476632	ppo-u.5 for 7470726	mtr-u.5 for 11409611	mtr-u.5 for 11432741	ghi-r.1 for 107962697	ghi-r.1 for 107959485	ghi-r.1 for 107937972	bna-r.1 for 106430903	bna-r.1 for BNAC09G44880D	bna-r.1 for 106358525	sot-r.1 for 102604884	sot-r.1 for 102598748	cit-r.1 for 102616975	cit-r.1 for 102608613	nta-r.1 for 107829307	nta-r.1 for 107830930	nta-r.1 for 107832735

Ortholog

Ortholog ID: 2925

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100192491

uncharacterized LOC103630114

uncharacterized LOC8084363

uncharacterized LOC8065883

uncharacterized LOC4325666

uncharacterized LOC4338002

uncharacterized LOC123060395

uncharacterized LOC123068932

uncharacterized LOC123077450

uncharacterized LOC123427196

uncharacterized LOC123442918

uncharacterized LOC100832747

uncharacterized LOC100822738

glycine-rich protein

ephrin type-B receptor

uncharacterized LOC100804207

uncharacterized LOC100783686

uncharacterized LOC101243915

uncharacterized LOC101261029

uncharacterized LOC103855923

uncharacterized LOC103846697

uncharacterized LOC103850279

uncharacterized LOC100243932

uncharacterized LOC100252538

uncharacterized LOC7476632

uncharacterized LOC7470726

uncharacterized LOC11409611

uncharacterized LOC11432741

uncharacterized LOC107962697

uncharacterized LOC107937972

uncharacterized LOC107901504

uncharacterized BNAC09G44880D

uncharacterized LOC106377576

uncharacterized BNAA03G52250D

uncharacterized LOC102604884

uncharacterized LOC102598748

uncharacterized LOC102616975

hypothetical protein

uncharacterized LOC107829307

uncharacterized LOC107830930

uncharacterized LOC107832735

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04148	Efferocytosis	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	4
sbi00562	Inositol phosphate metabolism	2
sbi04070	Phosphatidylinositol signaling system	2
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	9
tae04070	Phosphatidylinositol signaling system	9
tae04145	Phagosome	9
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	7
tae04070	Phosphatidylinositol signaling system	7
tae04145	Phagosome	7
tae03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	4
tae04070	Phosphatidylinositol signaling system	4
tae04145	Phagosome	4
tae03018	RNA degradation	4
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr03018	RNA degradation	2
mtr03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr04120	Ubiquitin mediated proteolysis	2
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	2
ghi04142	Lysosome	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3
bna00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	3
cit04120	Ubiquitin mediated proteolysis	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00190	Oxidative phosphorylation	2
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100192491

103630114

8084363

8065883

4325666

4338002

123060395

123068932

123077450

123427196

123442918

100832747

100822738

829429

831042

100804207

100783686

101243915

101261029

103855923

103846697

103850279

100243932

100252538

7476632

7470726

11409611

11432741

107962697

107937972

107901504

106424587

106377576

106423408

102604884

102598748

102616975

102608613

107829307

107830930

107832735

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	3	2	2	2	2	2	3	2	2	2	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192491 (zma-u.5 coexpression data)

Top 50 enrichment test to 100192491 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**