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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100193503   DEAD-box ATP-dependent RNA helicase 38 
 zma-r.6   100193503   DEAD-box ATP-dependent RNA helicase 38 
 zma-m.5   100193503   DEAD-box ATP-dependent RNA helicase 38 
 sbi-r.1   8085458   DEAD-box ATP-dependent RNA helicase 38 
 osa-u.5   4331680   DEAD-box ATP-dependent RNA helicase 38-like 
 tae-r.2   123084882   DEAD-box ATP-dependent RNA helicase 38 
 tae-r.2   123093207   DEAD-box ATP-dependent RNA helicase 38 
 tae-r.2   123098471   DEAD-box ATP-dependent RNA helicase 38 
 hvu-r.1   123449488   DEAD-box ATP-dependent RNA helicase 38 
 bdi-r.1   LOS4   DEAD-box ATP-dependent RNA helicase 38 
 ath-u.5   LOS4   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100784739   DEAD-box ATP-dependent RNA helicase 38 
 gma-u.5   100778091   DEAD-box ATP-dependent RNA helicase 38 
 sly-u.5   101243705   DEAD-box ATP-dependent RNA helicase 38 
 sly-u.5   101252541   DEAD-box ATP-dependent RNA helicase 38 
 bra-r.6   103850278   DEAD-box ATP-dependent RNA helicase 38 
 bra-r.6   103863439   DEAD-box ATP-dependent RNA helicase 38 
 vvi-u.5   100257270   DEAD-box ATP-dependent RNA helicase 38 
 vvi-u.5   100247027   DEAD-box ATP-dependent RNA helicase 38 
 vvi-u.5   100854880   DEAD-box ATP-dependent RNA helicase 38 
 ppo-u.5   18100101   DEAD-box ATP-dependent RNA helicase 38 
 mtr-u.5   25492156   DEAD-box ATP-dependent RNA helicase 38 
 mtr-u.5   11434133   DEAD-box ATP-dependent RNA helicase 38 
 ghi-r.1   107899509   DEAD-box ATP-dependent RNA helicase 38-like 
 ghi-r.1   107931533   DEAD-box ATP-dependent RNA helicase 38 
 bna-r.1   106452440   DEAD-box ATP-dependent RNA helicase 38-like 
 bna-r.1   106402035   DEAD-box ATP-dependent RNA helicase 38 
 bna-r.1   111203637   DEAD-box ATP-dependent RNA helicase 38 
 sot-r.1   102600806   DEAD-box ATP-dependent RNA helicase 38 
 cit-r.1   102609367   DEAD-box ATP-dependent RNA helicase 38 
 nta-r.1   107772250   DEAD-box ATP-dependent RNA helicase 38-like 
 nta-r.1   107782346   DEAD-box ATP-dependent RNA helicase 38-like 
 nta-r.1   107814119   DEAD-box ATP-dependent RNA helicase 38 
 cre-r.1   CHLRE_06g306850v5   uncharacterized protein 

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Top 50 coexpressed genes to 100193503 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100193503 (zma-u.5 coexpression data)

CoexMap"100193503"


zmaLOC100193503 | Entrez gene ID : 100193503      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 2 2 3 1 2 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03013 [list] [network] Nucleocytoplasmic transport (144 genes)
zma03015 [list] [network] mRNA surveillance pathway (165 genes)
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (80 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein NP_001132088.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  chlo_mito 1  (predict for NP_001132088.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001132088.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100193503
zma-r.6
for
100193503
zma-m.5
for
100193503
sbi-r.1
for
8085458
osa-u.5
for
4331680
tae-r.2
for
123084882
tae-r.2
for
123093207
tae-r.2
for
123098471
hvu-r.1
for
123449488
bdi-r.1
for
LOS4
ath-u.5
for
LOS4
gma-u.5
for
100784739
gma-u.5
for
100778091
sly-u.5
for
101243705
sly-u.5
for
101252541
bra-r.6
for
103850278
bra-r.6
for
103863439
vvi-u.5
for
100257270
vvi-u.5
for
100247027
vvi-u.5
for
100854880
ppo-u.5
for
18100101
mtr-u.5
for
25492156
mtr-u.5
for
11434133
ghi-r.1
for
107899509
ghi-r.1
for
107931533
bna-r.1
for
106452440
bna-r.1
for
106402035
bna-r.1
for
111203637
sot-r.1
for
102600806
cit-r.1
for
102609367
nta-r.1
for
107772250
nta-r.1
for
107782346
nta-r.1
for
107814119
cre-r.1
for
CHLRE_06g306850v5


Ortholog ID: 5128
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly sly bra bra vvi vvi vvi ppo mtr mtr ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC100193503 LOC8085458 LOC4331680 LOC123084882 LOC123098471 LOC123121195 LOC123449488 LOS4 LOS4 LOC100784739 LOC100778091 LOC101243705 LOC101252541 LOC103850278 LOC103863439 LOC100257270 LOC100247027 LOC100854880 LOC18100101 LOC25492156 LOC11434133 LOC107899509 LOC107931533 LOC106452440 LOC111203637 LOC106389130 LOC102600806 LOC102609367 LOC107772250 LOC107782346 LOC107825795 CHLRE_06g306850v5
Function* DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38-like DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38-like DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38-like DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38 DEAD-box ATP-dependent RNA helicase 38-like DEAD-box ATP-dependent RNA helicase 38-like DEAD-box ATP-dependent RNA helicase 38 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae01200 Carbon metabolism 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 8
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
bdi03013 Nucleocytoplasmic transport 4
bdi03015 mRNA surveillance pathway 4
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 7
gma03050 Proteasome 6
gma03008 Ribosome biogenesis in eukaryotes 5
gma03250 Viral life cycle - HIV-1 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03015 mRNA surveillance pathway 2
bra03018 RNA degradation 2
bra00190 Oxidative phosphorylation 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03250 Viral life cycle - HIV-1 3
ppo01200 Carbon metabolism 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot00480 Glutathione metabolism 3
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03015 mRNA surveillance pathway 3
cit04141 Protein processing in endoplasmic reticulum 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100193503 8085458 4331680 123084882 123098471 123121195 123449488 100841980 824477 100784739 100778091 101243705 101252541 103850278 103863439 100257270 100247027 100854880 18100101 25492156 11434133 107899509 107931533 106452440 111203637 106389130 102600806 102609367 107772250 107782346 107825795 5716869
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