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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100193975   uncharacterized LOC100193975 
 zma-r.6   100193975   uncharacterized LOC100193975 
 zma-m.5   100193975   uncharacterized LOC100193975 
 osa-u.5   4331348   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 ath-u.5   AT2G23370   cyclin delta-3 
 ath-u.5   AT4G34090   cyclin delta-3 
 gma-u.5   100809304   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 gma-u.5   100800367   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 sly-u.5   101267465   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 vvi-u.5   100268130   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 vvi-u.5   100250309   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 ppo-u.5   7490044   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 ppo-u.5   7483102   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 
 mtr-u.5   11427177   protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic 

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Top 50 coexpressed genes to 100193975 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100193975 (zma-u.5 coexpression data)

CoexMap"100193975"


zmaLOC100193975 | Entrez gene ID : 100193975      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001132515.1 [sequence] [blastp]
XP_035817953.1 [sequence] [blastp]
XP_035817954.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_001132515.1)
chlo 7,  mito 3  (predict for XP_035817953.1)
cyto 7,  chlo 2  (predict for XP_035817954.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001132515.1)
mito 5  (predict for XP_035817953.1)
other 6,  chlo 3  (predict for XP_035817954.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100193975
zma-r.6
for
100193975
zma-m.5
for
100193975
osa-u.5
for
4331348
ath-u.5
for
AT2G23370
ath-u.5
for
AT4G34090
gma-u.5
for
100809304
gma-u.5
for
100800367
sly-u.5
for
101267465
vvi-u.5
for
100268130
vvi-u.5
for
100250309
ppo-u.5
for
7490044
ppo-u.5
for
7483102
mtr-u.5
for
11427177


Ortholog ID: 6498
Species zma sbi osa tae tae hvu bdi ath ath gma gma sly bra bra vvi vvi ppo ppo mtr ghi ghi bna bna sot cit cit nta nta cre
Symbol LOC100193975 LOC8078020 LOC4331348 LOC123094017 LOC123099207 LOC123450047 LOC100833623 AT4G34090 AT2G23370 LOC100809304 LOC100800367 LOC101267465 LOC103862318 LOC103842416 LOC100268130 LOC100250309 LOC7483102 LOC7490044 LOC11427177 LOC107913228 LOC107894286 LOC106436716 LOC106368647 LOC102583668 LOC102617893 LOC102619583 LOC107815685 LOC107806111 CHLRE_13g563150v5
Function* uncharacterized LOC100193975 uncharacterized LOC8078020 protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like uncharacterized LOC100833623 cyclin delta-3 cyclin delta-3 protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like uncharacterized LOC102583668 protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00970 Aminoacyl-tRNA biosynthesis 3
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae04146 Peroxisome 3
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
bdi00220 Arginine biosynthesis 2
bdi00330 Arginine and proline metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 3
ath03060 Protein export 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03060 Protein export 2
ghi00230 Purine metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100193975 8078020 4331348 123094017 123099207 123450047 100833623 829555 816869 100809304 100800367 101267465 103862318 103842416 100268130 100250309 7483102 7490044 11427177 107913228 107894286 106436716 106368647 102583668 102617893 102619583 107815685 107806111 5718982
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