ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100194066	uncharacterized LOC100194066
zma-r.6	100194066	uncharacterized LOC100194066
zma-m.5	100194066	uncharacterized LOC100194066
zma-u.5	103652669	RHOMBOID-like protein 1
zma-u.5	100274505	membrane protein
zma-u.5	100284897	membrane protein
osa-u.5	4349148	RHOMBOID-like protein 2
osa-u.5	4331402	RHOMBOID-like protein 2
osa-u.5	4347634	RHOMBOID-like protein 2
ath-u.5	RBL1	RHOMBOID-like 1
ath-u.5	RBL2	RHOMBOID-like 2
gma-u.5	100813345	RHOMBOID-like protein 2
gma-u.5	100809265	RHOMBOID-like protein 2
sly-u.5	101268356	RHOMBOID-like protein 2
sly-u.5	101258586	RHOMBOID-like protein 1
vvi-u.5	100241704	RHOMBOID-like protein 1
vvi-u.5	100257915	RHOMBOID-like protein 1
ppo-u.5	7484388	RHOMBOID-like protein 2
ppo-u.5	7454931	RHOMBOID-like protein 1
mtr-u.5	11414014	RHOMBOID-like protein 1
mtr-u.5	11412678	RHOMBOID-like protein 2

Annotation

functional annotation

KEGG

GO BP

GO:0006508 [list] [network] proteolysis

(984 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity

(139 genes)

IEA

Protein

NP_001345829.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, pero 3, cyto_plas 3

(predict for NP_001345829.1)

Subcellular
localization
TargetP

other 9

(predict for NP_001345829.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100194066	zma-r.6 for 100194066	zma-m.5 for 100194066	zma-u.5 for 103652669	zma-u.5 for 100274505	zma-u.5 for 100284897	osa-u.5 for 4349148	osa-u.5 for 4331402	osa-u.5 for 4347634	ath-u.5 for RBL1	ath-u.5 for RBL2	gma-u.5 for 100813345	gma-u.5 for 100809265	sly-u.5 for 101268356	sly-u.5 for 101258586	vvi-u.5 for 100241704	vvi-u.5 for 100257915	ppo-u.5 for 7484388	ppo-u.5 for 7454931	mtr-u.5 for 11414014	mtr-u.5 for 11412678

Ortholog

Ortholog ID: 228

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

cit

nta

cre

Symbol

RBL1

Function^*

uncharacterized LOC100194066

RHOMBOID-like protein 2

RHOMBOID-like 1

inactive rhomboid protein 1-like

RHOMBOID-like protein 2

RHOMBOID-like protein 1

RHOMBOID-like protein 4

RHOMBOID-like protein 1

RHOMBOID-like protein 3

RHOMBOID-like protein 2

RHOMBOID-like protein 3

RHOMBOID-like protein 4

RHOMBOID-like protein 2

RHOMBOID-like protein 1

RHOMBOID-like protein 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	4
osa01250	Biosynthesis of nucleotide sugars	4
osa00040	Pentose and glucuronate interconversions	3
osa00053	Ascorbate and aldarate metabolism	3
osa00541	Biosynthesis of various nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2
osa00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00999	Biosynthesis of various plant secondary metabolites	2
ppo00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	3
mtr00040	Pentose and glucuronate interconversions	2
mtr00592	alpha-Linolenic acid metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
cit01230	Biosynthesis of amino acids	2
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	8
nta04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	3
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

100194066

8057858

8076372

4336706

4346228

123190034

123124002

123449923

123400016

100824334

100842800

817453

100784671

100813345

101258586

103841301

100241704

100257915

7454498

25499980

107962383

106440713

102624089

102621290

107811134

107779142

5721258

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100194066 (zma-u.5 coexpression data)

Top 50 enrichment test to 100194066 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	2	2	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100194066 (zma-u.5 coexpression data)

Top 50 enrichment test to 100194066 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**