ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100216980	uncharacterized LOC100216980
zma-r.6	100216980	uncharacterized LOC100216980
sbi-r.1	8066230	uncharacterized LOC8066230
osa-u.5	4333173	uncharacterized LOC4333173
tae-r.2	123182759	uncharacterized LOC123182759
tae-r.2	123141797	uncharacterized LOC123141797
tae-r.2	123064570	uncharacterized LOC123064570
hvu-r.1	123448624	uncharacterized LOC123448624
bdi-r.1	100831104	uncharacterized LOC100831104
ath-u.5	AT3G49840	transmembrane protein (DUF2215)
ath-u.5	AT5G67610	transmembrane protein (DUF2215)
gma-u.5	100810145	uncharacterized LOC100810145
gma-u.5	100795492	uncharacterized LOC100795492
sly-u.5	101248544	uncharacterized LOC101248544
bra-r.6	103874036	uncharacterized LOC103874036
vvi-u.5	104878704	uncharacterized LOC104878704
ppo-u.5	18101246	uncharacterized LOC18101246
mtr-u.5	11420567	uncharacterized LOC11420567
ghi-r.1	107924401	uncharacterized LOC107924401
ghi-r.1	107945465	uncharacterized LOC107945465
bna-r.1	106348167	uncharacterized LOC106348167
bna-r.1	BNAC03G48660D	uncharacterized BNAC03G48660D
sot-r.1	102586574	uncharacterized LOC102586574
cit-r.1	102626832	uncharacterized LOC102626832
nta-r.1	107803577	uncharacterized LOC107803577
nta-r.1	107761130	uncharacterized LOC107761130

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001136831.1 [sequence] [blastp]
XP_020402700.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 2, E.R. 1	(predict for NP_001136831.1)
plas 5, chlo 3, E.R. 1, chlo_mito 1	(predict for XP_020402700.1)

Subcellular
localization
TargetP

scret 8	(predict for NP_001136831.1)
scret 8	(predict for XP_020402700.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100216980	zma-r.6 for 100216980	sbi-r.1 for 8066230	osa-u.5 for 4333173	tae-r.2 for 123182759	tae-r.2 for 123141797	tae-r.2 for 123064570	hvu-r.1 for 123448624	bdi-r.1 for 100831104	ath-u.5 for AT3G49840	ath-u.5 for AT5G67610	gma-u.5 for 100810145	gma-u.5 for 100795492	sly-u.5 for 101248544	bra-r.6 for 103874036	vvi-u.5 for 104878704	ppo-u.5 for 18101246	mtr-u.5 for 11420567	ghi-r.1 for 107924401	ghi-r.1 for 107945465	bna-r.1 for 106348167	bna-r.1 for BNAC03G48660D	sot-r.1 for 102586574	cit-r.1 for 102626832	nta-r.1 for 107803577	nta-r.1 for 107761130

Ortholog

Ortholog ID: 9528

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100216980

uncharacterized LOC8066230

uncharacterized LOC4333173

uncharacterized LOC123182759

uncharacterized LOC123141797

uncharacterized LOC123064570

uncharacterized LOC123448624

uncharacterized LOC100831104

transmembrane protein (DUF2215)

uncharacterized LOC100810145

uncharacterized LOC100795492

uncharacterized LOC101248544

uncharacterized LOC103874036

uncharacterized LOC104878704

uncharacterized LOC18101246

uncharacterized LOC11420567

uncharacterized LOC107924401

uncharacterized LOC107945465

uncharacterized LOC106348167

uncharacterized BNAC03G48660D

uncharacterized LOC102586574

uncharacterized LOC102626832

uncharacterized LOC107803577

uncharacterized LOC107761130

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae03013	Nucleocytoplasmic transport	2
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3
tae03022	Basal transcription factors	3
tae03420	Nucleotide excision repair	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma03410	Base excision repair	3
gma03460	Fanconi anemia pathway	2
gma03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	2
gma03410	Base excision repair	2
gma03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4
sot03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100216980

8066230

4333173

123182759

123141797

123064570

123448624

100831104

824146

836897

100810145

100795492

101248544

103874036

104878704

18101246

11420567

107924401

107945465

106348167

106443991

102586574

102626832

107803577

107761130

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100216980 (zma-u.5 coexpression data)

Top 50 enrichment test to 100216980 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	1	3	1	1	2	2	1	1	1	1	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100216980 (zma-u.5 coexpression data)

Top 50 enrichment test to 100216980 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**