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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100241856   transcription factor bHLH48 
 vvi-r.5   100241856   transcription factor bHLH48 
 vvi-m.5   100241856   transcription factor bHLH48 
 ath-u.5   AT2G42300   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT3G57800   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100814124   transcription factor bHLH48 
 gma-u.5   100810862   transcription factor bHLH48 
 gma-u.5   PTF1   transcription factor bHLH48-like 
 ppo-u.5   7468956   transcription factor bHLH48 
 ppo-u.5   18099855   transcription factor bHLH48 
 mtr-u.5   11421654   transcription factor bHLH48 
 mtr-u.5   11431256   transcription factor bHLH60 
 sly-u.5   101258908   transcription factor bHLH48 
 osa-u.5   4341525   transcription factor bHLH48 
 zma-u.5   103629727   transcription factor bHLH48 
 zma-u.5   100273300   uncharacterized LOC100273300 

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Top 50 coexpressed genes to 100241856 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100241856 (vvi-u.5 coexpression data)

CoexMap"100241856"


vviLOC100241856 | Entrez gene ID : 100241856      
Species vvi ath gma ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 2 3 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (449 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002282897.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_002282897.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002282897.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100241856
vvi-r.5
for
100241856
vvi-m.5
for
100241856
ath-u.5
for
AT2G42300
ath-u.5
for
AT3G57800
gma-u.5
for
100814124
gma-u.5
for
100810862
gma-u.5
for
PTF1
ppo-u.5
for
7468956
ppo-u.5
for
18099855
mtr-u.5
for
11421654
mtr-u.5
for
11431256
sly-u.5
for
101258908
osa-u.5
for
4341525
zma-u.5
for
103629727
zma-u.5
for
100273300


Ortholog ID: 4057
Species vvi ath ath gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC100241856 AT2G42300 AT3G57800 LOC100814124 PTF1 LOC103830121 LOC103841682 LOC18099855 LOC7468956 LOC11431256 LOC11421654 LOC121213998 LOC107924526 LOC106390275 LOC106438441 LOC102609347 LOC101258908 LOC102582980 LOC107800340 LOC107823459 LOC4341525 LOC100273300 LOC103629727 LOC123160148 LOC123153536 LOC123411689 LOC8082443 LOC100823833
Function* transcription factor bHLH48 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH60 transcription factor bHLH60 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH60 transcription factor bHLH48 transcription factor bHLH60 transcription factor bHLH48 transcription factor bHLH60 transcription factor bHLH60-like transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48 uncharacterized LOC100273300 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48 transcription factor bHLH48-like transcription factor bHLH48 transcription factor bHLH48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr00071 Fatty acid degradation 2
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
mtr00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi03010 Ribosome 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100241856 818831 825530 100814124 100795486 103830121 103841682 18099855 7468956 11431256 11421654 121213998 107924526 106390275 106438441 102609347 101258908 102582980 107800340 107823459 4341525 100273300 103629727 123160148 123153536 123411689 8082443 100823833
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