ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100242423	uncharacterized LOC100242423
vvi-r.5	100242423	uncharacterized LOC100242423
vvi-m.5	100242423	uncharacterized LOC100242423
vvi-u.5	100257013	uncharacterized LOC100257013
ath-u.5	AT2G35050	kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
ath-u.5	AT1G16270	kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
ath-u.5	AT1G79570	kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
gma-u.5	100799118	uncharacterized LOC100799118
gma-u.5	100799639	uncharacterized LOC100799639
gma-u.5	100801946	uncharacterized LOC100801946
bra-r.6	103842857	serine/threonine-protein kinase STE20
bra-r.6	103830477	uncharacterized LOC103830477
bra-r.6	103857556	uncharacterized LOC103857556
ppo-u.5	7479203	uncharacterized LOC7479203
ppo-u.5	7462551	uncharacterized LOC7462551
ppo-u.5	7480431	uncharacterized LOC7480431
mtr-u.5	25479862	probable serine/threonine-protein kinase DDB_G0267686
mtr-u.5	25502340	uncharacterized LOC25502340
mtr-u.5	120578222	uncharacterized LOC120578222
ghi-r.1	107945230	uncharacterized LOC107945230
ghi-r.1	121229309	uncharacterized LOC121229309
ghi-r.1	107935860	uncharacterized LOC107935860
bna-r.1	125588681	uncharacterized LOC125588681
bna-r.1	125589202	uncharacterized LOC125589202
bna-r.1	106448876	serine/threonine-protein kinase STE20-like
cit-r.1	102629157	uncharacterized LOC102629157
cit-r.1	102618380	uncharacterized LOC102618380
sly-u.5	101248152	uncharacterized LOC101248152
sly-u.5	101248436	uncharacterized LOC101248436
sot-r.1	102604218	uncharacterized LOC102604218
sot-r.1	102595305	uncharacterized LOC102595305
sot-r.1	102604714	uncharacterized LOC102604714
nta-r.1	107826164	RAF-like serine/threonine-protein kinase 20
nta-r.1	107821022	RAF-like serine/threonine-protein kinase 24
nta-r.1	107814022	RAF-like serine/threonine-protein kinase 24
osa-u.5	4343083	uncharacterized LOC4343083
zma-u.5	542192	salt-inducible protein kinase
tae-r.2	123163025	probable serine/threonine-protein kinase mkcB
tae-r.2	123123998	serine/threonine-protein kinase STE20
tae-r.2	123114499	uncharacterized LOC123114499
hvu-r.1	123395268	uncharacterized LOC123395268
sbi-r.1	8075992	uncharacterized LOC8075992
sbi-r.1	8059231	serine/threonine-protein kinase EDR1
bdi-r.1	100828846	uncharacterized LOC100828846
bdi-r.1	100839142	uncharacterized LOC100839142

Top 50 coexpressed genes to 100242423 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100242423 (vvi-u.5 coexpression data)

CoexMap"100242423"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007165 [list] [network] signal transduction	(749 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1262 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(4496 genes)

IEA

GO MF

GO:0004672 [list] [network] protein kinase activity	(1297 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA
GO:0005515 [list] [network] protein binding	(4232 genes)	IEA

Protein

XP_002276237.2 [sequence] [blastp]
XP_010648992.1 [sequence] [blastp]
XP_019079072.1 [sequence] [blastp]
XP_059593548.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, vacu 1, pero 1, cyto_pero 1	(predict for XP_002276237.2)
nucl 8, cyto 1, vacu 1, pero 1, cyto_pero 1	(predict for XP_010648992.1)
nucl 8, cyto 1, vacu 1, pero 1, cyto_pero 1	(predict for XP_019079072.1)
nucl 8, cyto 1, vacu 1, pero 1, cyto_pero 1	(predict for XP_059593548.1)

Subcellular
localization
TargetP

other 7, mito 3	(predict for XP_002276237.2)
other 7, mito 3	(predict for XP_010648992.1)
other 7, mito 3	(predict for XP_019079072.1)
other 7, mito 3	(predict for XP_059593548.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100242423	vvi-r.5 for 100242423	vvi-m.5 for 100242423	vvi-u.5 for 100257013	ath-u.5 for AT2G35050	ath-u.5 for AT1G16270	ath-u.5 for AT1G79570	gma-u.5 for 100799118	gma-u.5 for 100799639	gma-u.5 for 100801946	bra-r.6 for 103842857	bra-r.6 for 103830477	bra-r.6 for 103857556	ppo-u.5 for 7479203	ppo-u.5 for 7462551	ppo-u.5 for 7480431	mtr-u.5 for 25479862	mtr-u.5 for 25502340	mtr-u.5 for 120578222	ghi-r.1 for 107945230	ghi-r.1 for 121229309	ghi-r.1 for 107935860	bna-r.1 for 125588681	bna-r.1 for 125589202	bna-r.1 for 106448876	cit-r.1 for 102629157	cit-r.1 for 102618380	sly-u.5 for 101248152	sly-u.5 for 101248436	sot-r.1 for 102604218	sot-r.1 for 102595305	sot-r.1 for 102604714	nta-r.1 for 107826164	nta-r.1 for 107821022	nta-r.1 for 107814022	osa-u.5 for 4343083	zma-u.5 for 542192	tae-r.2 for 123163025	tae-r.2 for 123123998	tae-r.2 for 123114499	hvu-r.1 for 123395268	sbi-r.1 for 8075992	sbi-r.1 for 8059231	bdi-r.1 for 100828846	bdi-r.1 for 100839142

Ortholog

Ortholog ID: 2266

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100242423

uncharacterized LOC100257013

kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein

uncharacterized LOC100799118

uncharacterized LOC100816522

uncharacterized LOC100817937

serine/threonine-protein kinase STE20

uncharacterized LOC103832427

uncharacterized LOC7479203

uncharacterized LOC7462551

uncharacterized LOC7480431

probable serine/threonine-protein kinase DDB_G0267686

uncharacterized LOC25502340

uncharacterized LOC120578222

uncharacterized LOC107945230

uncharacterized LOC121229309

uncharacterized LOC107935860

uncharacterized LOC106430720

uncharacterized LOC106405637

uncharacterized LOC106346785

uncharacterized LOC102629157

uncharacterized LOC102618380

uncharacterized LOC101248152

uncharacterized LOC101248436

uncharacterized LOC102604218

uncharacterized LOC102595305

uncharacterized LOC102604714

RAF-like serine/threonine-protein kinase 24

RAF-like serine/threonine-protein kinase 20

uncharacterized LOC4343083

salt-inducible protein kinase

probable serine/threonine-protein kinase mkcB

serine/threonine-protein kinase STE20

uncharacterized LOC123114499

uncharacterized LOC123395268

uncharacterized LOC8075992

serine/threonine-protein kinase EDR1

uncharacterized LOC100828846

uncharacterized LOC100839142

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04142	Lysosome	3
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	6
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo00020	Citrate cycle (TCA cycle)	3
ppo01200	Carbon metabolism	3
ppo01210	2-Oxocarboxylic acid metabolism	3
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	5
mtr03082	ATP-dependent chromatin remodeling	2
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00511	Other glycan degradation	3
ghi00600	Sphingolipid metabolism	3
ghi04382	Cornified envelope formation	3
ghi03030	DNA replication	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	4
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	3
nta03018	RNA degradation	2
nta04814	Motor proteins	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta03018	RNA degradation	2
nta04814	Motor proteins	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	4
nta04120	Ubiquitin mediated proteolysis	2
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma00562	Inositol phosphate metabolism	2
zma04070	Phosphatidylinositol signaling system	2
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03250	Viral life cycle - HIV-1	3
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	3
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03083	Polycomb repressive complex	2
bdi03250	Viral life cycle - HIV-1	2

Expression

Expression pattern

Entrez Gene ID^*

100242423

100257013

818070

838196

844295

100799118

100816522

100817937

103842857

103865372

103832427

7479203

7462551

7480431

25479862

25502340

120578222

107945230

121229309

107935860

106430720

106405637

106346785

102629157

102618380

101248152

101248436

102604218

102595305

102604714

107814022

107794208

107787525

4343083

542192

123163025

123123998

123114499

123395268

8075992

8059231

100828846

100839142

The preparation time of this page was 0.2 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	2	2	3	3	1	1	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100242423 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100242423 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**