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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 vvi-r.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 vvi-m.5   100242520   dihydroxy-acid dehydratase, chloroplastic 
 ath-u.5   AT3G23940   dehydratase family 
 gma-u.5   100806689   putative dihydroxy-acid dehydratase, mitochondrial-like 
 ppo-u.5   7478279   dihydroxy-acid dehydratase, chloroplastic 
 ppo-u.5   7460521   dihydroxy-acid dehydratase, chloroplastic 
 mtr-u.5   11422645   dihydroxy-acid dehydratase, chloroplastic 
 sly-u.5   101264707   dihydroxy-acid dehydratase-like 
 sly-u.5   101246533   dihydroxy-acid dehydratase, chloroplastic 
 osa-u.5   4346318   dihydroxy-acid dehydratase, chloroplastic 
 zma-u.5   100273676   Dihydroxy-acid dehydratase chloroplastic 
 zma-u.5   100384514   Dihydroxy-acid dehydratase chloroplastic 

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Top 50 coexpressed genes to 100242520 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242520 (vvi-u.5 coexpression data)

CoexMap"100242520"


vviLOC100242520 | Entrez gene ID : 100242520      
Species vvi ath gma ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00290 [list] [network] Valine, leucine and isoleucine biosynthesis (17 genes)
vvi00770 [list] [network] Pantothenate and CoA biosynthesis (36 genes)
vvi01210 [list] [network] 2-Oxocarboxylic acid metabolism (81 genes)
vvi01230 [list] [network] Biosynthesis of amino acids (211 genes)
GO BP
GO:0009082 [list] [network] branched-chain amino acid biosynthetic process  (12 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (103 genes)  IEA  
GO MF
GO:0004160 [list] [network] dihydroxy-acid dehydratase activity  (1 genes)  IEA  
Protein XP_002285667.1 [sequence] [blastp]
XP_059592953.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_002285667.1)
chlo 7,  mito 3  (predict for XP_059592953.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002285667.1)
chlo 9  (predict for XP_059592953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242520

.
vvi-r.5
for
100242520

.
vvi-m.5
for
100242520

.
ath-u.5
for
AT3G23940

.
gma-u.5
for
100806689

.
ppo-u.5
for
7478279

.
ppo-u.5
for
7460521

.
mtr-u.5
for
11422645

.
sly-u.5
for
101264707

.
sly-u.5
for
101246533

.
osa-u.5
for
4346318

.
zma-u.5
for
100273676

.
zma-u.5
for
100384514

.


Ortholog ID: 6570
Species ath gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G23940 LOC100806689 LOC101264707 LOC101246533 LOC4346318 LOC100384514 LOC100273676 LOC103831845 LOC103828655 LOC100242520 LOC7478279 LOC7460521 LOC11422645 LOC123165567 LOC123157147 LOC123407417 LOC107957083 LOC107914890 LOC106451505 LOC106450576 CHLRE_03g206600v5 LOC8057977 LOC102606211 LOC102603493 LOC102607008 LOC100829216 LOC107787836 LOC107782074
Function* dehydratase family putative dihydroxy-acid dehydratase, mitochondrial-like dihydroxy-acid dehydratase-like dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic Dihydroxy-acid dehydratase chloroplastic Dihydroxy-acid dehydratase chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic uncharacterized protein dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic-like dihydroxy-acid dehydratase, chloroplastic-like dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic dihydroxy-acid dehydratase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 14
ath00300 Lysine biosynthesis 6
ath00230 Purine metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 4
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma00053 Ascorbate and aldarate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00230 Purine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 3
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma01230 Biosynthesis of amino acids 3
zma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01230 Biosynthesis of amino acids 4
zma00770 Pantothenate and CoA biosynthesis 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra00250 Alanine, aspartate and glutamate metabolism 4
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 4
bra01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 6
bra00250 Alanine, aspartate and glutamate metabolism 5
bra01240 Biosynthesis of cofactors 5
bra00230 Purine metabolism 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae01232 Nucleotide metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu03018 RNA degradation 3
hvu00300 Lysine biosynthesis 3
hvu00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00770 Pantothenate and CoA biosynthesis 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00770 Pantothenate and CoA biosynthesis 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
cre01230 Biosynthesis of amino acids 3
cre03008 Ribosome biogenesis in eukaryotes 2
cre01240 Biosynthesis of cofactors 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00220 Arginine biosynthesis 3
sot00240 Pyrimidine metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01240 Biosynthesis of cofactors 5
sot00061 Fatty acid biosynthesis 4
sot01212 Fatty acid metabolism 4
sot00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit04626 Plant-pathogen interaction 3
cit01230 Biosynthesis of amino acids 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821977 100806689 101264707 101246533 4346318 100384514 100273676 103831845 103828655 100242520 7478279 7460521 11422645 123165567 123157147 123407417 107957083 107914890 106451505 106450576 5718841 8057977 102606211 102603493 102607008 100829216 107787836 107782074
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