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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100243264   double-stranded RNA-binding protein 3 
 vvi-r.5   100243264   double-stranded RNA-binding protein 3 
 ath-u.5   DRB4   double-stranded-RNA-binding protein 4 
 gma-u.5   100306453   double-stranded RNA binding motif-containing protein 
 bra-r.6   103842082   double-stranded RNA-binding protein 4 
 ppo-u.5   18108247   double-stranded RNA-binding protein 1 
 ppo-u.5   112325693   double-stranded RNA-binding protein 1 
 ghi-r.1   107903851   double-stranded RNA-binding protein 1 
 ghi-r.1   107893770   double-stranded RNA-binding protein 1 
 bna-r.1   106420272   double-stranded RNA-binding protein 4-like 
 bna-r.1   106415757   double-stranded RNA-binding protein 4 
 cit-r.1   102630955   double-stranded RNA-binding protein 4-like 
 sly-u.5   101261264   double-stranded RNA-binding protein 4 
 sot-r.1   102590508   double-stranded RNA-binding protein 1-like 
 nta-r.1   107827437   double-stranded RNA-binding protein 1 
 nta-r.1   107768358   double-stranded RNA-binding protein 1 
 nta-r.1   142176332   uncharacterized LOC142176332 
 osa-u.5   4324620   double-stranded RNA-binding protein 1-like 
 zma-u.5   100383324   uncharacterized LOC100383324 

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Top 50 coexpressed genes to 100243264 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100243264 (vvi-u.5 coexpression data)

CoexMap"100243264"


vviLOC100243264 | Entrez gene ID : 100243264    
Species vvi ath gma bra ppo ghi bna cit sly sot nta osa zma cre sbi tae mtr hvu bdi
Paralog 2 1 1 1 2 2 2 1 1 1 3 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_010653187.1 [sequence] [blastp]
XP_010653188.1 [sequence] [blastp]
XP_010653189.1 [sequence] [blastp]
XP_059594861.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_010653187.1)
nucl 9,  plas 1,  golg_plas 1  (predict for XP_010653188.1)
nucl 10  (predict for XP_010653189.1)
nucl 9,  plas 1,  golg_plas 1  (predict for XP_059594861.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_010653187.1)
mito 7  (predict for XP_010653188.1)
other 6,  mito 3  (predict for XP_010653189.1)
mito 7  (predict for XP_059594861.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100243264
vvi-r.5
for
100243264
ath-u.5
for
DRB4
gma-u.5
for
100306453
bra-r.6
for
103842082
ppo-u.5
for
18108247
ppo-u.5
for
112325693
ghi-r.1
for
107903851
ghi-r.1
for
107893770
bna-r.1
for
106420272
bna-r.1
for
106415757
cit-r.1
for
102630955
sly-u.5
for
101261264
sot-r.1
for
102590508
nta-r.1
for
107827437
nta-r.1
for
107768358
nta-r.1
for
142176332
osa-u.5
for
4324620
zma-u.5
for
100383324


Ortholog ID: 6913
Species vvi ath gma bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta nta osa zma
Symbol LOC100243264 DRB4 LOC100306453 LOC103842082 LOC18108247 LOC112325693 LOC25495853 LOC107903851 LOC107893770 LOC106420272 LOC106415757 LOC102630955 LOC101261264 LOC102590508 LOC107827437 LOC107768358 LOC142176332 LOC4324620 LOC100383324
Function* double-stranded RNA-binding protein 3 double-stranded-RNA-binding protein 4 double-stranded RNA binding motif-containing protein double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 4-like double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 4-like double-stranded RNA-binding protein 4 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 uncharacterized LOC142176332 double-stranded RNA-binding protein 1-like uncharacterized LOC100383324
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03020 RNA polymerase 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243264 825455 100306453 103842082 18108247 112325693 25495853 107903851 107893770 106420272 106415757 102630955 101261264 102590508 107827437 107768358 142176332 4324620 100383324
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