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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100243481   uncharacterized LOC100243481 
 vvi-r.5   100243481   uncharacterized LOC100243481 
 vvi-m.5   100243481   uncharacterized LOC100243481 
 ath-u.5   AT4G39040   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100779359   uncharacterized LOC100779359 
 bra-r.6   103864268   uncharacterized LOC103864268 
 bra-r.6   103828066   bromo and FHA domain-containing protein DDB_G0267958 
 ppo-u.5   7456344   uncharacterized LOC7456344 
 mtr-u.5   11443147   uncharacterized LOC11443147 
 ghi-r.1   107927995   uncharacterized LOC107927995 
 ghi-r.1   107944987   uncharacterized LOC107944987 
 bna-r.1   106410741   uncharacterized LOC106410741 
 cit-r.1   102616136   uncharacterized LOC102616136 
 sly-u.5   101264983   uncharacterized LOC101264983 
 sot-r.1   102582473   uncharacterized LOC102582473 
 nta-r.1   107791554   uncharacterized LOC107791554 
 nta-r.1   107759865   uncharacterized LOC107759865 
 osa-u.5   4349098   uncharacterized LOC4349098 
 zma-u.5   100194294   CRS1 / YhbY domain containing protein 
 tae-r.2   123158832   uncharacterized LOC123158832 
 tae-r.2   123078607   uncharacterized LOC123078607 
 tae-r.2   123048542   uncharacterized LOC123048542 
 hvu-r.1   123434226   uncharacterized LOC123434226 
 sbi-r.1   8065855   uncharacterized LOC8065855 
 bdi-r.1   100826154   uncharacterized LOC100826154 
 cre-r.1   CHLRE_14g625901v5   uncharacterized protein 
 cre-r.1   CHLRE_10g421200v5   uncharacterized protein 

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Top 50 coexpressed genes to 100243481 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100243481 (vvi-u.5 coexpression data)

CoexMap"100243481"


vviLOC100243481 | Entrez gene ID : 100243481      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 1 2 1 1 1 1 2 1 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002265886.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_002265886.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002265886.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100243481
vvi-r.5
for
100243481
vvi-m.5
for
100243481
ath-u.5
for
AT4G39040
gma-u.5
for
100779359
bra-r.6
for
103864268
bra-r.6
for
103828066
ppo-u.5
for
7456344
mtr-u.5
for
11443147
ghi-r.1
for
107927995
ghi-r.1
for
107944987
bna-r.1
for
106410741
cit-r.1
for
102616136
sly-u.5
for
101264983
sot-r.1
for
102582473
nta-r.1
for
107791554
nta-r.1
for
107759865
osa-u.5
for
4349098
zma-u.5
for
100194294
tae-r.2
for
123158832
tae-r.2
for
123078607
tae-r.2
for
123048542
hvu-r.1
for
123434226
sbi-r.1
for
8065855
bdi-r.1
for
100826154
cre-r.1
for
CHLRE_14g625901v5
cre-r.1
for
CHLRE_10g421200v5


Ortholog ID: 7922
Species vvi ath gma bra bra ppo mtr ghi ghi bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC100243481 AT4G39040 LOC100779359 LOC103864268 LOC103828066 LOC7456344 LOC11443147 LOC107927995 LOC107944987 LOC106349496 LOC102616136 LOC101264983 LOC102582473 LOC107791554 LOC107759865 LOC4349098 LOC100194294 LOC123158832 LOC123078607 LOC123048542 LOC123434226 LOC8065855 LOC100826154 CHLRE_14g625901v5 CHLRE_10g421200v5
Function* uncharacterized LOC100243481 RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized LOC100779359 uncharacterized LOC103864268 bromo and FHA domain-containing protein DDB_G0267958 uncharacterized LOC7456344 uncharacterized LOC11443147 uncharacterized LOC107927995 uncharacterized LOC107944987 uncharacterized LOC106349496 uncharacterized LOC102616136 uncharacterized LOC101264983 uncharacterized LOC102582473 uncharacterized LOC107791554 uncharacterized LOC107759865 uncharacterized LOC4349098 CRS1 / YhbY domain containing protein uncharacterized LOC123158832 uncharacterized LOC123078607 uncharacterized LOC123048542 uncharacterized LOC123434226 uncharacterized LOC8065855 uncharacterized LOC100826154 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243481 830059 100779359 103864268 103828066 7456344 11443147 107927995 107944987 106349496 102616136 101264983 102582473 107791554 107759865 4349098 100194294 123158832 123078607 123048542 123434226 8065855 100826154 66056279 5728270
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