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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100243802   probable thylakoidal processing peptidase 2, chloroplastic-like 
 vvi-r.5   100243802   probable thylakoidal processing peptidase 2, chloroplastic-like 
 vvi-m.5   100243802   probable thylakoidal processing peptidase 2, chloroplastic-like 
 ath-u.5   TPP   thylakoid processing peptide 
 ath-u.5   Plsp2A   Peptidase S24/S26A/S26B/S26C family protein 
 gma-u.5   100817525   probable thylakoidal processing peptidase 2, chloroplastic 
 gma-u.5   100802457   thylakoidal processing peptidase 1, chloroplastic 
 ppo-u.5   18104955   uncharacterized LOC18104955 
 mtr-u.5   11417737   probable thylakoidal processing peptidase 2, chloroplastic 
 mtr-u.5   11431369   thylakoidal processing peptidase 1, chloroplastic 
 sly-u.5   101263904   thylakoidal processing peptidase 1, chloroplastic-like 
 osa-u.5   4347239   thylakoidal processing peptidase 1, chloroplastic 
 zma-u.5   100284377   uncharacterized LOC100284377 
 zma-u.5   100283156   uncharacterized LOC100283156 
 zma-u.5   100502377   uncharacterized LOC100502377 

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Top 50 coexpressed genes to 100243802 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100243802 (vvi-u.5 coexpression data)

CoexMap"100243802"


vviLOC100243802 | Entrez gene ID : 100243802    
Species vvi ath gma ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 2 1 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03060 [list] [network] Protein export (51 genes)
GO BP
GO:0010027 [list] [network] thylakoid membrane organization  (12 genes)  IEA  
GO:0006465 [list] [network] signal peptide processing  (17 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (82 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (139 genes)  IEA  
Protein XP_002284120.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002284120.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002284120.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100243802

.
vvi-r.5
for
100243802

.
vvi-m.5
for
100243802

.
ath-u.5
for
TPP

.
ath-u.5
for
Plsp2A

.
gma-u.5
for
100817525

.
gma-u.5
for
100802457

.
ppo-u.5
for
18104955

.
mtr-u.5
for
11417737

.
mtr-u.5
for
11431369

.
sly-u.5
for
101263904

.
osa-u.5
for
4347239

.
zma-u.5
for
100284377

.
zma-u.5
for
100283156

.
zma-u.5
for
100502377

.


Ortholog ID: 4354
Species ath ath gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol Plsp2A TPP LOC100817525 LOC100802457 LOC101263904 LOC4347239 LOC100283156 LOC100502377 LOC103843490 LOC103844003 LOC100243802 LOC18104955 LOC11417737 LOC11431369 LOC123121713 LOC123105133 LOC123398564 LOC123452382 LOC107940692 LOC107935597 LOC106348401 LOC106419826 LOC8083972 LOC8062772 LOC102587949 LOC102630129 LOC100845632 LOC107804945 LOC107822399
Function* Peptidase S24/S26A/S26B/S26C family protein thylakoid processing peptide probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic uncharacterized LOC100283156 uncharacterized LOC100502377 probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic-like uncharacterized LOC18104955 probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic-like uncharacterized LOC100845632 thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00270 Cysteine and methionine metabolism 3
gma00020 Citrate cycle (TCA cycle) 3
gma03060 Protein export 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma03083 Polycomb repressive complex 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04626 Plant-pathogen interaction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 4
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04075 Plant hormone signal transduction 3
mtr04626 Plant-pathogen interaction 3
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
tae04626 Plant-pathogen interaction 3
tae03060 Protein export 3
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04146 Peroxisome 3
nta04626 Plant-pathogen interaction 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 4
nta04146 Peroxisome 3
nta04626 Plant-pathogen interaction 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837198 817595 100817525 100802457 101263904 4347239 100283156 100502377 103843490 103844003 100243802 18104955 11417737 11431369 123121713 123105133 123398564 123452382 107940692 107935597 106348401 106419826 8083972 8062772 102587949 102630129 100845632 107804945 107822399
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