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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100245437   uncharacterized LOC100245437 
 vvi-r.5   100245437   uncharacterized LOC100245437 
 vvi-m.5   100245437   uncharacterized LOC100245437 
 ath-u.5   AT2G17975   zinc finger (Ran-binding) family protein 
 gma-u.5   100801066   uncharacterized LOC100801066 
 gma-u.5   100784874   calpain-15 
 ppo-u.5   18099204   uncharacterized LOC18099204 
 mtr-u.5   11422569   uncharacterized RNA-binding protein C17H9.04c 
 sly-u.5   101246695   ranBP2-type zinc finger protein At1g67325 
 osa-u.5   4334930   ranBP2-type zinc finger protein At1g67325 
 zma-u.5   100193180   uncharacterized LOC100193180 
 zma-u.5   100273468   uncharacterized LOC100273468 
 zma-u.5   100285397   uncharacterized LOC100285397 

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Top 50 coexpressed genes to 100245437 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100245437 (vvi-u.5 coexpression data)

CoexMap"100245437"


vviLOC100245437 | Entrez gene ID : 100245437      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
Protein XP_002268619.2 [sequence] [blastp]
XP_010649045.1 [sequence] [blastp]
XP_010649046.1 [sequence] [blastp]
XP_059592433.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002268619.2)
mito 6,  nucl 2,  chlo 1,  cyto_nucl 1  (predict for XP_010649045.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_010649046.1)
mito 4,  chlo 4,  nucl 2,  cyto_mito 2,  mito_plas 2  (predict for XP_059592433.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002268619.2)
other 7  (predict for XP_010649045.1)
mito 8,  chlo 4  (predict for XP_010649046.1)
mito 8,  chlo 4  (predict for XP_059592433.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100245437
vvi-r.5
for
100245437
vvi-m.5
for
100245437
ath-u.5
for
AT2G17975
gma-u.5
for
100801066
gma-u.5
for
100784874
ppo-u.5
for
18099204
mtr-u.5
for
11422569
sly-u.5
for
101246695
osa-u.5
for
4334930
zma-u.5
for
100193180
zma-u.5
for
100273468
zma-u.5
for
100285397


Ortholog ID: 8876
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi
Symbol LOC100245437 AT2G17975 LOC100801066 LOC100784874 LOC103828444 LOC18099204 LOC11422569 LOC107897603 LOC107914260 LOC106451665 LOC111199187 LOC102616338 LOC101246695 LOC102589410 LOC107778889 LOC107776138 LOC4334930 LOC100273468 LOC100193180 LOC123051086 LOC123187028 LOC123424391 LOC8065964
Function* uncharacterized LOC100245437 zinc finger (Ran-binding) family protein uncharacterized LOC100801066 calpain-15 uncharacterized LOC103828444 uncharacterized LOC18099204 uncharacterized RNA-binding protein C17H9.04c nuclear pore complex protein Nup153 uncharacterized LOC107914260 uncharacterized LOC106451665 uncharacterized LOC111199187 uncharacterized LOC102616338 ranBP2-type zinc finger protein At1g67325 ranBP2-type zinc finger protein At1g67325 uncharacterized LOC107778889 ranBP2-type zinc finger protein At1g67325 ranBP2-type zinc finger protein At1g67325 uncharacterized LOC100273468 uncharacterized LOC100193180 nuclear pore complex protein Nup153 E3 SUMO-protein ligase RanBP2 asparagine-rich protein uncharacterized RNA-binding protein C17H9.04c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00340 Histidine metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00410 beta-Alanine metabolism 3
ppo00330 Arginine and proline metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00270 Cysteine and methionine metabolism 2
mtr00920 Sulfur metabolism 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 4
osa00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
zma04144 Endocytosis 3
zma05100 Bacterial invasion of epithelial cells 3
zma03015 mRNA surveillance pathway 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 3
zma00740 Riboflavin metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae00220 Arginine biosynthesis 2
tae00330 Arginine and proline metabolism 2
tae01230 Biosynthesis of amino acids 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 9
sbi04145 Phagosome 8
sbi04142 Lysosome 3
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100245437 816309 100801066 100784874 103828444 18099204 11422569 107897603 107914260 106451665 111199187 102616338 101246695 102589410 107778889 107776138 4334930 100273468 100193180 123051086 123187028 123424391 8065964
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