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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100245619   phosphoribosylglycinamide formyltransferase, chloroplastic 
 vvi-r.5   100245619   phosphoribosylglycinamide formyltransferase, chloroplastic 
 ath-u.5   AT1G31220   Formyl transferase 
 gma-u.5   PUR3   glycinamide ribonucleotide transformylase 
 gma-u.5   100784486   phosphoribosylglycinamide formyltransferase, chloroplastic 
 bra-r.6   103840262   phosphoribosylglycinamide formyltransferase, chloroplastic 
 ppo-u.5   18103829   phosphoribosylglycinamide formyltransferase, chloroplastic 
 mtr-u.5   11431305   phosphoribosylglycinamide formyltransferase, chloroplastic 
 ghi-r.1   107961941   phosphoribosylglycinamide formyltransferase, chloroplastic 
 ghi-r.1   107910072   phosphoribosylglycinamide formyltransferase, chloroplastic 
 bna-r.1   106366708   phosphoribosylglycinamide formyltransferase, chloroplastic 
 bna-r.1   106349175   phosphoribosylglycinamide formyltransferase, chloroplastic 
 cit-r.1   102631099   phosphoribosylglycinamide formyltransferase, chloroplastic 
 sly-u.5   101252648   phosphoribosylglycinamide formyltransferase, chloroplastic 
 sot-r.1   102577623   glycinamide ribonucleotide transformylase 
 nta-r.1   107803256   phosphoribosylglycinamide formyltransferase, chloroplastic 
 nta-r.1   142166170   phosphoribosylglycinamide formyltransferase, chloroplastic-like 
 osa-u.5   4345953   phosphoribosylglycinamide formyltransferase, chloroplastic 
 osa-u.5   112939360   phosphoribosylglycinamide formyltransferase, chloroplastic 
 zma-u.5   100272448   Phosphoribosylglycinamide formyltransferase chloroplastic 
 tae-r.2   123069501   phosphoribosylglycinamide formyltransferase, chloroplastic 
 tae-r.2   123151680   phosphoribosylglycinamide formyltransferase, chloroplastic 
 hvu-r.1   123410286   phosphoribosylglycinamide formyltransferase, chloroplastic 
 sbi-r.1   8080300   phosphoribosylglycinamide formyltransferase, chloroplastic 
 bdi-r.1   100832826   phosphoribosylglycinamide formyltransferase, chloroplastic 
 bdi-r.1   100841354   phosphoribosylglycinamide formyltransferase, chloroplastic 
 cre-r.1   CHLRE_12g550700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100245619 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100245619 (vvi-u.5 coexpression data)

CoexMap"100245619"


vviLOC100245619 | Entrez gene ID : 100245619      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 2 2 1 1 1 2 2 1 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00230 [list] [network] Purine metabolism (85 genes)
vvi00670 [list] [network] One carbon pool by folate (40 genes)
GO BP
GO:0006189 [list] [network] 'de novo' IMP biosynthetic process  (7 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0004644 [list] [network] phosphoribosylglycinamide formyltransferase activity  (1 genes)  IEA  
Protein XP_002264133.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  vacu 1,  E.R._vacu 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_002264133.2)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_002264133.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100245619
vvi-r.5
for
100245619
ath-u.5
for
AT1G31220
gma-u.5
for
PUR3
gma-u.5
for
100784486
bra-r.6
for
103840262
ppo-u.5
for
18103829
mtr-u.5
for
11431305
ghi-r.1
for
107961941
ghi-r.1
for
107910072
bna-r.1
for
106366708
bna-r.1
for
106349175
cit-r.1
for
102631099
sly-u.5
for
101252648
sot-r.1
for
102577623
nta-r.1
for
107803256
nta-r.1
for
142166170
osa-u.5
for
4345953
osa-u.5
for
112939360
zma-u.5
for
100272448
tae-r.2
for
123069501
tae-r.2
for
123151680
hvu-r.1
for
123410286
sbi-r.1
for
8080300
bdi-r.1
for
100832826
bdi-r.1
for
100841354
cre-r.1
for
CHLRE_12g550700v5


Ortholog ID: 8269
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC100245619 AT1G31220 PUR3 LOC100784486 LOC103840262 LOC18103829 LOC11431305 LOC107961941 LOC107910072 LOC106366708 LOC106349175 LOC102631099 LOC101252648 LOC102577623 LOC107803256 LOC142166170 LOC4345953 LOC112939360 LOC100272448 LOC123069501 LOC123151680 LOC123410286 LOC8080300 LOC100832826 LOC100841354 CHLRE_12g550700v5
Function* phosphoribosylglycinamide formyltransferase, chloroplastic Formyl transferase glycinamide ribonucleotide transformylase phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic glycinamide ribonucleotide transformylase phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic-like phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic Phosphoribosylglycinamide formyltransferase chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic phosphoribosylglycinamide formyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00230 Purine metabolism 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 7
gma01230 Biosynthesis of amino acids 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00230 Purine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00770 Pantothenate and CoA biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00670 One carbon pool by folate 6
tae04141 Protein processing in endoplasmic reticulum 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
tae03015 mRNA surveillance pathway 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00230 Purine metabolism 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01232 Nucleotide metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
cre00270 Cysteine and methionine metabolism 2
cre01230 Biosynthesis of amino acids 2
cre01240 Biosynthesis of cofactors 2
cre00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100245619 840010 548052 100784486 103840262 18103829 11431305 107961941 107910072 106366708 106349175 102631099 101252648 102577623 107803256 142166170 4345953 112939360 100272448 123069501 123151680 123410286 8080300 100832826 100841354 5719656
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