ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100245979	uncharacterized LOC100245979
vvi-r.5	100245979	uncharacterized LOC100245979
vvi-m.5	100245979	uncharacterized LOC100245979
vvi-u.5	104879764	uncharacterized LOC104879764
vvi-u.5	100254594	uncharacterized LOC100254594
ath-u.5	AT2G47820	arginine-glutamic acid dipeptide repeat protein
gma-u.5	100807168	uncharacterized LOC100807168
gma-u.5	100809377	uncharacterized LOC100809377
gma-u.5	102665859	uncharacterized LOC102665859
ppo-u.5	18110907	uncharacterized LOC18110907
ppo-u.5	7475960	uncharacterized LOC7475960
ppo-u.5	7481747	uncharacterized LOC7481747
mtr-u.5	11425649	uncharacterized LOC11425649
mtr-u.5	11442030	uncharacterized LOC11442030
sly-u.5	101254833	uncharacterized LOC101254833
osa-u.5	4332820	uncharacterized LOC4332820
osa-u.5	4343640	uncharacterized LOC4343640
zma-u.5	100279470	uncharacterized LOC100279470
zma-u.5	100381518	uncharacterized LOC100381518
zma-u.5	103634765	uncharacterized LOC103634765

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(2597 genes)

IEA

GO MF

GO:0003714 [list] [network] transcription corepressor activity

(29 genes)

IEA

Protein

XP_002275999.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_002275999.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002275999.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100245979	vvi-r.5 for 100245979	vvi-m.5 for 100245979	vvi-u.5 for 104879764	vvi-u.5 for 100254594	ath-u.5 for AT2G47820	gma-u.5 for 100807168	gma-u.5 for 100809377	gma-u.5 for 102665859	ppo-u.5 for 18110907	ppo-u.5 for 7475960	ppo-u.5 for 7481747	mtr-u.5 for 11425649	mtr-u.5 for 11442030	sly-u.5 for 101254833	osa-u.5 for 4332820	osa-u.5 for 4343640	zma-u.5 for 100279470	zma-u.5 for 100381518	zma-u.5 for 103634765

Ortholog

Ortholog ID: 1969

Species

vvi

ath

gma

bra

ppo

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100254594

uncharacterized LOC104879764

arginine-glutamic acid dipeptide repeat protein

uncharacterized LOC100807168

uncharacterized LOC103858259

uncharacterized LOC18098688

uncharacterized LOC7481747

uncharacterized LOC107908673

uncharacterized LOC107893648

uncharacterized LOC106438363

uncharacterized LOC111214058

uncharacterized LOC102624452

uncharacterized LOC102629830

uncharacterized LOC101254833

uncharacterized LOC102604919

uncharacterized LOC107761674

uncharacterized LOC107774544

uncharacterized LOC4332820

uncharacterized LOC4343640

uncharacterized LOC103634765

uncharacterized LOC100381518

uncharacterized LOC123091973

uncharacterized LOC123085836

uncharacterized LOC123448652

uncharacterized LOC123448654

uncharacterized LOC8081767

uncharacterized LOC8082297

uncharacterized LOC100828743

uncharacterized LOC100836195

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo00300	Lysine biosynthesis	2
ppo01230	Biosynthesis of amino acids	2
ppo03030	DNA replication	2
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04626	Plant-pathogen interaction	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00561	Glycerolipid metabolism	2
bdi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100254594

104879764

819394

100807168

103858259

18098688

7481747

107908673

107893648

106438363

111214058

102624452

102629830

101254833

102604919

107761674

107774544

4332820

4343640

103634765

100381518

123091973

123085836

123448652

123448654

8081767

8082297

100828743

100836195

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100245979 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100245979 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	3	3	2	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100245979 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100245979 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**