ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100246317	protein HOTHEAD
vvi-r.5	100246317	protein HOTHEAD
vvi-u.5	100266705	protein HOTHEAD
vvi-u.5	100264005	protein HOTHEAD
ath-u.5	AT3G56060	Glucose-methanol-choline (GMC) oxidoreductase family protein
ath-u.5	HTH	Glucose-methanol-choline (GMC) oxidoreductase family protein
gma-u.5	100818122	protein HOTHEAD
gma-u.5	100796752	protein HOTHEAD
bra-r.6	103852814	protein HOTHEAD
bra-r.6	103841513	protein HOTHEAD
bra-r.6	103841509	protein HOTHEAD
ppo-u.5	7492933	(R)-mandelonitrile lyase-like
ppo-u.5	7492934	(R)-mandelonitrile lyase-like
mtr-u.5	11432941	protein HOTHEAD
mtr-u.5	11417572	protein HOTHEAD
ghi-r.1	107930056	protein HOTHEAD
ghi-r.1	107926983	protein HOTHEAD
ghi-r.1	107923256	protein HOTHEAD
bna-r.1	106360817	protein HOTHEAD-like
cit-r.1	102613980	protein HOTHEAD
cit-r.1	102626131	protein HOTHEAD
cit-r.1	102630146	protein HOTHEAD
sly-u.5	101244002	protein HOTHEAD
sly-u.5	101250204	(R)-mandelonitrile lyase-like
sly-u.5	101264132	protein HOTHEAD
sot-r.1	102602541	protein HOTHEAD
sot-r.1	102588108	protein HOTHEAD-like
nta-r.1	107807670	protein HOTHEAD-like
nta-r.1	107772908	protein HOTHEAD-like
nta-r.1	107767080	protein HOTHEAD
osa-u.5	4345513	protein HOTHEAD
zma-u.5	100280292	uncharacterized LOC100280292
zma-u.5	100192014	protein HOTHEAD
tae-r.2	123069580	protein HOTHEAD
tae-r.2	123046259	protein HOTHEAD
sbi-r.1	8073219	protein HOTHEAD
sbi-r.1	8055580	protein HOTHEAD
bdi-r.1	100830847	protein HOTHEAD
bdi-r.1	100836391	protein HOTHEAD
cre-r.1	CHLRE_12g514200v5	uncharacterized protein

Top 50 coexpressed genes to 100246317 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100246317 (vvi-u.5 coexpression data)

CoexMap"100246317"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi00073 [list] [network] Cutin, suberine and wax biosynthesis (29 genes)

GO BP

GO CC

GO MF

GO:0050660 [list] [network] flavin adenine dinucleotide binding	(145 genes)	IEA
GO:0016614 [list] [network] oxidoreductase activity, acting on CH-OH group of donors	(224 genes)	IEA

Protein

XP_010654524.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, E.R. 2, E.R._plas 2, cyto 1, cysk_nucl 1, plas 1, cyto_pero 1

(predict for XP_010654524.1)

Subcellular
localization
TargetP

scret 5

(predict for XP_010654524.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100246317	vvi-r.5 for 100246317	vvi-u.5 for 100266705	vvi-u.5 for 100264005	ath-u.5 for AT3G56060	ath-u.5 for HTH	gma-u.5 for 100818122	gma-u.5 for 100796752	bra-r.6 for 103852814	bra-r.6 for 103841513	bra-r.6 for 103841509	ppo-u.5 for 7492933	ppo-u.5 for 7492934	mtr-u.5 for 11432941	mtr-u.5 for 11417572	ghi-r.1 for 107930056	ghi-r.1 for 107926983	ghi-r.1 for 107923256	bna-r.1 for 106360817	cit-r.1 for 102613980	cit-r.1 for 102626131	cit-r.1 for 102630146	sly-u.5 for 101244002	sly-u.5 for 101250204	sly-u.5 for 101264132	sot-r.1 for 102602541	sot-r.1 for 102588108	nta-r.1 for 107807670	nta-r.1 for 107772908	nta-r.1 for 107767080	osa-u.5 for 4345513	zma-u.5 for 100280292	zma-u.5 for 100192014	tae-r.2 for 123069580	tae-r.2 for 123046259	sbi-r.1 for 8073219	sbi-r.1 for 8055580	bdi-r.1 for 100830847	bdi-r.1 for 100836391	cre-r.1 for CHLRE_12g514200v5

Ortholog

Ortholog ID: 274

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HTH

Function^*

protein HOTHEAD

Glucose-methanol-choline (GMC) oxidoreductase family protein

protein HOTHEAD

protein HOTHEAD-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

protein HOTHEAD

uncharacterized LOC100382402

protein HOTHEAD

protein HOTHEAD-like

protein HOTHEAD

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma00073	Cutin, suberine and wax biosynthesis	2
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	3
ppo02010	ABC transporters	3
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00531	Glycosaminoglycan degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00770	Pantothenate and CoA biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00053	Ascorbate and aldarate metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi01240	Biosynthesis of cofactors	4
ghi01250	Biosynthesis of nucleotide sugars	4
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00020	Citrate cycle (TCA cycle)	4
bna00620	Pyruvate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00071	Fatty acid degradation	2
cit01240	Biosynthesis of cofactors	2
cit00061	Fatty acid biosynthesis	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00902	Monoterpenoid biosynthesis	3
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	4
nta00940	Phenylpropanoid biosynthesis	2
nta00270	Cysteine and methionine metabolism	2
nta00543	Exopolysaccharide biosynthesis	2
nta00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	3
zma04626	Plant-pathogen interaction	3
zma04016	MAPK signaling pathway - plant	2
zma00073	Cutin, suberine and wax biosynthesis	2
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	4
zma00500	Starch and sucrose metabolism	2
zma00270	Cysteine and methionine metabolism	2
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae02010	ABC transporters	3
tae04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi01040	Biosynthesis of unsaturated fatty acids	3
bdi01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	5

Expression

Expression pattern

Entrez Gene ID^*

100246317

100264005

100241724

843628

837979

837978

100796752

100784433

100777238

103857158

18094858

7478081

25500449

107906346

107896618

107947284

106404872

106415883

102626131

102630146

101244002

101264132

101248806

102602541

102587321

107767080

107811073

9266710

100192014

100281523

100382402

123049493

123061007

123190021

123395083

8073219

8055580

100836391

5728543

The preparation time of this page was 0.2 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	sbi	bdi	cre	hvu
Paralog	4	2	2	3	2	2	3	1	3	3	2	3	1	2	2	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100246317 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100246317 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**